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PacificBiosciences
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FALCON_unzip
Making diploid assembly becomes common practice for genomic study
BSD 3-Clause Clear License
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FALCON Unzip ERROR during first step in "reads" folder
#120
uceleste
closed
6 years ago
1
running unzip using raw or preads assembly failing at track_reads.sh
#119
rob123king
closed
6 years ago
3
question about falcon unzip result
#118
Jeff-Liu9453
opened
6 years ago
1
Qs: FALCON-unzip pipeline result
#117
olechnwin
opened
6 years ago
0
[ERROR]Task Node(1-preads_ovl) failed with exit-code=256
#116
AteeqMKhaliq
opened
6 years ago
1
specify custom nproc for blasr
#115
leleory
opened
6 years ago
3
unzip 1-hasm phased_ovlp_to_graph Error
#114
nottwy
closed
6 years ago
2
Falcon outputs to Falcon_unzip
#113
Jeff-Liu9453
closed
6 years ago
2
Falcon_unzip can't deal with the HGAP4' output
#112
jun3234
closed
6 years ago
1
unzip uses too much memories
#111
nottwy
closed
6 years ago
3
[ERROR]Task Node(3-unzip/0-phasing/000000F) failed with exit-code=1
#110
DuskLi
closed
6 years ago
5
ngmlr instead of blasr
#109
mictadlo
closed
6 years ago
2
Arrow support
#108
mictadlo
opened
6 years ago
0
running test data error on first command
#107
rob123king
closed
6 years ago
1
How to install?
#106
Wildish-LBL
closed
6 years ago
1
LA4Falcon faild.
#105
WenchaoLin
closed
6 years ago
2
'Empty read_set. Maybe empty {!}?'.format(map_fn)
#104
fbemm
closed
6 years ago
2
Grid options for het_call
#103
olekto
closed
6 years ago
8
ERROR - Task Node(3-unzip/reads) failed with exit-code=256
#102
agroppi
closed
6 years ago
3
fc_quiver and phasing
#101
a-velt
closed
6 years ago
4
Falcon Unzip with Assembly fasta as input
#100
ian15brown
opened
6 years ago
1
Is it right to have track_reads_done.exit and OSError in all.log?
#99
lamz138138
closed
6 years ago
1
Task Node(3-unzip/0-phasing/000010F/blasr) failed with exit-code=256
#98
yanboANU
closed
6 years ago
10
falcon_erro
#97
fanyucai1
closed
6 years ago
0
a question on FALCON_unzip primary and haplotigs explaination
#96
wsuplantpathology
closed
6 years ago
4
Update README.md
#95
mhsieh
closed
7 years ago
0
how to generate _reads.fa file under the directory '3-unzip/reads' manually?
#94
nottwy
closed
7 years ago
0
unzip (installed on 20170823) failed at the task 0-phasing/012822F/blasr/task.json
#93
nottwy
closed
6 years ago
13
unzip 1-hasm complains of missing edge
#92
jasmynp
closed
6 years ago
9
falcon unzip qsub has no -P parameter when 3-unzip/1-hasm/rid-to-phase-all,so the job is still queue
#91
orangeSi
closed
7 years ago
0
Falcon Unzip Concurrents are not working
#90
AfterRain
closed
6 years ago
4
FC_Quiver Unable to remove heartbeat
#89
AfterRain
closed
6 years ago
0
FC_Quiver Fail to open file
#88
AfterRain
closed
7 years ago
1
The difference between unzip.py and the output shell command in 0-phasing/blasr
#87
jiabeiphy
closed
7 years ago
1
Why the outputs of falcon_unzip is shorter than the falcon's outputs ?
#86
myshu2017-03-14
opened
7 years ago
0
falcon_uznip input BAM?
#85
shilpagarg
opened
7 years ago
0
where to find falcon_unzip fc_unzip.cfg example ?
#84
orangeSi
closed
7 years ago
0
Problem with HDF5 and downloaded binary
#83
pb-cdunn
closed
7 years ago
4
I start from corrected reads, but unzip doesn't work
#82
jamescjc123
closed
6 years ago
4
Falcon Unzip crashed at 0-phasing (blasr ?)
#81
agroppi
opened
7 years ago
6
Question about FALCON_UNZIP tracing back the reads
#80
bostanict
opened
7 years ago
2
Quiver question regarding arrow algorithm
#79
wyim-pgl
opened
7 years ago
0
LD_LIBRARY_PATH is resetting
#78
wyim-pgl
closed
7 years ago
5
falcon_unzip breaks down when running blasr
#77
yilunhuangyue
opened
7 years ago
2
Are all the haplotigs in one contig correctly phased?
#76
bostanict
opened
7 years ago
2
consensus-calling with arrow for contigs absent from all_p_ctg.fa but present in p_ctg.fa
#75
sjin09
opened
7 years ago
1
Configuring to run with SLURM
#74
graffico
opened
7 years ago
1
FALCON_unzip successful with Ecoli sample, but failed with my own data
#73
wsuplantpathology
opened
7 years ago
4
steps for install and running FALCON_unzip
#72
wsuplantpathology
closed
7 years ago
8
input_bam.fofn contents
#71
wyim-pgl
closed
6 years ago
15
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