issues
search
TileDB-Inc
/
TileDB-VCF
Efficient variant-call data storage and retrieval library using the TileDB storage library.
https://tiledb-inc.github.io/TileDB-VCF/
MIT License
83
stars
13
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
[JAVA-API] Support reads using a BED array
#646
DimitrisStaratzis
closed
6 months ago
0
The nightly build job failed on Thursday (2023-12-21)
#645
github-actions[bot]
closed
5 months ago
7
Java/Spark 0.28.0
#644
awenocur
closed
6 months ago
1
Handle resume ingestion for annotation VCFs
#643
gspowley
closed
6 months ago
1
Java/Spark 0.26.7
#642
awenocur
closed
6 months ago
1
Only clear non-empty buffers during ingestion
#641
gspowley
closed
6 months ago
1
Java/Spark 0.27.1
#640
awenocur
closed
6 months ago
1
Migrate macOS CI to GitHub Actions
#639
jdblischak
closed
6 months ago
0
Update Embedded to 2.19
#638
awenocur
closed
6 months ago
1
[Backport release-0.27] Embedded 2.18.3
#637
github-actions[bot]
closed
6 months ago
0
Don't deploy docs on forks
#636
jdblischak
closed
6 months ago
0
Embedded 2.18.3
#635
awenocur
closed
6 months ago
1
Fix CI on Release 0.26 series
#634
awenocur
closed
6 months ago
1
[Backport release-0.26] Reduce memory usage and improve perf when reading VCF headers
#633
github-actions[bot]
closed
6 months ago
1
[Backport release-0.27] Reduce memory usage and improve perf when reading VCF headers
#632
github-actions[bot]
closed
6 months ago
0
Reduce memory usage and improve perf when reading VCF headers
#631
gspowley
closed
7 months ago
1
The nightly build job failed on Friday (2023-12-08)
#630
github-actions[bot]
closed
7 months ago
8
Support reads using a BED array
#629
gspowley
closed
7 months ago
1
Use System pip to install TileDB-Py
#628
awenocur
closed
2 weeks ago
2
[Backport release-0.27] TileDB 2.18.2
#627
github-actions[bot]
closed
7 months ago
0
Bump release branch to 2.18 for nightly builds
#626
jdblischak
closed
7 months ago
2
The nightly build job failed on Wednesday (2023-11-29)
#625
github-actions[bot]
closed
7 months ago
10
TileDB-VCF 0.26.6 with TileDB 2.17.5
#624
awenocur
closed
7 months ago
1
Build failing in linux/arm64 Ubuntu VM
#623
dotinspace
closed
4 months ago
9
TileDB 2.18.2
#622
awenocur
closed
7 months ago
2
Java/Spark 0.26.5
#621
awenocur
closed
7 months ago
1
[Backport release-0.26] Load VCF headers when required for in-memory exports
#620
github-actions[bot]
closed
7 months ago
0
Load VCF headers when required for in-memory exports
#619
gspowley
closed
7 months ago
1
add support for the variant stats API
#618
DimitrisStaratzis
opened
7 months ago
0
Java/Spark 0.26.4
#617
awenocur
closed
8 months ago
1
Bump pyarrow from 11 to 14.0.1 in /ci/nightly
#616
dependabot[bot]
closed
2 weeks ago
2
[Backport release-0.26] In-memory export of VCF info flags
#615
github-actions[bot]
closed
8 months ago
0
[Backport release-0.26] Variant Stats Direct Interface with IAF column
#614
github-actions[bot]
closed
8 months ago
0
In-memory export of VCF info flags
#613
gspowley
closed
8 months ago
1
The nightly build job failed on Saturday (2023-11-04)
#612
github-actions[bot]
closed
7 months ago
4
Backport Embedded 2.17.4 update
#611
awenocur
closed
8 months ago
2
Update Embedded to 2.17.4
#610
awenocur
closed
8 months ago
2
Nightly build for Windows
#609
jdblischak
opened
8 months ago
4
Update Java/Spark for TileDB-VCF 0.26.2
#608
awenocur
closed
8 months ago
1
Upgrade to Embedded 2.17.3 (backport)
#607
awenocur
closed
8 months ago
1
[Backport release-0.26] Handle '=' in tiledb config values
#606
github-actions[bot]
closed
8 months ago
0
Handle '=' in tiledb config values
#605
gspowley
closed
8 months ago
1
[Backport release-0.26] Allow calls with missing genotypes to pass the IAF filter
#604
github-actions[bot]
closed
8 months ago
0
Azure blob storage credential parsing problem
#603
vstathias
closed
8 months ago
6
Allow calls with missing genotypes to pass the IAF filter
#602
gspowley
closed
8 months ago
2
Upgrade to Embedded 2.17.3
#601
awenocur
closed
8 months ago
2
[Backport release-0.26] Allow REF calls to pass the IAF filter
#600
github-actions[bot]
closed
8 months ago
0
Allow REF calls to pass the IAF filter
#599
gspowley
closed
8 months ago
1
The nightly build job failed on Friday (2023-10-20)
#598
github-actions[bot]
closed
8 months ago
4
Variant Stats Direct Interface with IAF column
#597
awenocur
closed
8 months ago
1
Previous
Next