issues
search
arq5x
/
lumpy-sv
lumpy: a general probabilistic framework for structural variant discovery
MIT License
306
stars
118
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Release source files are all version 0.2.13 code
#348
mwaldron104
opened
3 years ago
1
Full source archive for v0.3.1
#347
Stikus
opened
3 years ago
4
A lot of warning messages in make steps.
#346
YiBenqiu
opened
3 years ago
4
lumpy installation in Centos7
#345
nitha26
opened
3 years ago
1
Which Version of lumpy-Sv Should I Use?
#344
nitha26
opened
3 years ago
0
lumpy_filter returns exit code 84
#343
rsolano1-uw
opened
3 years ago
0
Interpretation of AS and AP
#342
EddieKHHo
opened
3 years ago
0
Error: invalid FORMAT field, "+"
#341
edgarsierraorozco
opened
3 years ago
0
Confuse in discordant paired-end or paired-end ?
#340
PhanNgan
opened
4 years ago
0
There seems to be some bugs in the scripts l_sort.py&l_merge.py
#339
MaoSihong
opened
4 years ago
2
PE=0 for all SVs derived from 10X Long Ranger bams.
#338
andrewSharo
opened
4 years ago
3
lumpyexpress - samblaster:input file is empty.
#337
kaelanelson
opened
4 years ago
1
Increased hardware requirements and run-time for build38
#336
MinocheAE
opened
4 years ago
0
Lumpy_filter error and which is the best way to generate the discordant paired-end alignments
#335
biozzq
opened
4 years ago
4
Error during running lumpyexpress
#334
adily777
opened
4 years ago
1
Error during LUMPY installation
#333
dottdifranco
opened
4 years ago
0
What level BAM should Lumpy be run on
#332
icanwinwyz
opened
4 years ago
1
Using a non-bundled htslib version
#331
samfux84
closed
4 years ago
4
lumpyexpress produce no CNV output
#330
swu13
opened
4 years ago
1
Lumpyexpress produces no output and no errors for one sample
#329
calizilla
closed
4 years ago
1
Use of soft clipped reads in Lumpy
#328
lee039
opened
4 years ago
5
Threshold for evaluating CNV variants
#327
HyunjunNam
opened
4 years ago
0
lumpyexpress: line 15: -n: command not found
#326
lqsae
opened
4 years ago
4
Lumpy specifies an inversion with two breakends only
#325
jazberna1
closed
4 years ago
2
REF column are all N,
#324
shengwugou
opened
4 years ago
2
9th column in the evidence line
#323
Leelouh
opened
4 years ago
0
extremely large deletions and duplications
#322
lee039
opened
4 years ago
5
Is a argument I can get seq (like ATGC) not N ?
#321
jinyue10086
opened
4 years ago
0
the problem of genetype missing rate
#320
zhangjijin
opened
4 years ago
1
can lumpy detect a dup cnv while it is also a inversion?
#319
tamadezhenshiyuncai
opened
4 years ago
0
Segmentation fault error in a subset of samples using LUMPY Express
#318
info-97
opened
4 years ago
0
Soft-clipped reads and indel realignment
#317
renzobalb
opened
4 years ago
0
lumpy executable not found
#316
yangzhuang0916
opened
4 years ago
1
Inversion frequency
#315
Yiguan
opened
4 years ago
0
lumpyexpress segmentation fault on a subset of samples
#314
sofieobr
closed
4 years ago
13
Is <INV> the inversions I needed in output VCF file?
#313
Yiguan
opened
4 years ago
1
RG handeling
#312
JJBio
opened
4 years ago
2
command not found for lumpyexpress
#311
SaraAlthubaiti
closed
4 years ago
2
target sequencing?
#310
tyyiyi
opened
4 years ago
4
Google Forum
#309
tyyiyi
opened
4 years ago
0
deletion called by lumpy without obvious drop in depth in graph
#308
shannjiang
opened
5 years ago
1
Lumpy bamlibs.py error
#307
nelsonchanhk
opened
5 years ago
3
Lumpy express for multiple samples, no sample identifier.
#306
nelsonchanhk
opened
5 years ago
1
Install errors
#305
hepcat72
closed
5 years ago
2
Readme.md install" git clone error
#304
darked89
opened
5 years ago
0
display 0.3.0 version
#303
sfehrmann
closed
2 years ago
1
head instead of tail ?
#302
lindenb
closed
5 years ago
2
Lumpyexpress does not run but do not appears error messages, why it can happen?
#301
Martaprf
opened
5 years ago
10
return 0
#300
brentp
closed
5 years ago
0
Some error raised and some questions
#299
codeunsolved
closed
5 years ago
2
Previous
Next