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bcgsc
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mavis
Merging, Annotation, Validation, and Illustration of Structural variants
http://mavis.bcgsc.ca
GNU General Public License v3.0
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Use textwrap.dedent
#236
creisle
opened
3 years ago
0
Release/v2.2.9
#235
creisle
closed
3 years ago
2
TypeError: sequence item 0: expected str instance, NoneType found
#234
moldach
opened
3 years ago
3
Feature/rtd fixes
#233
creisle
closed
3 years ago
1
"Bio.Alphabet has been removed from Biopython
#232
moldach
closed
3 years ago
9
Add labelling for frame
#231
creisle
opened
3 years ago
0
Release/v2.2.8
#230
calchoo
closed
3 years ago
1
Figures not being drawn for most chromosomes and missing annotation information
#229
moldach
opened
3 years ago
6
No drawings in example output
#228
moldach
closed
3 years ago
10
Bugfix/fix mismatched annotation
#227
calchoo
closed
3 years ago
1
Schedule : Stopping submission. Dependencies not complete
#226
Nitin123-4
closed
3 years ago
8
API for GRCH37 (Ensembl_75) and also for Mouse genome
#225
Nitin123-4
closed
3 years ago
2
only upload coverage once
#224
creisle
closed
4 years ago
1
Feature/markdown user manual
#223
creisle
closed
4 years ago
1
Release/v2.2.7
#222
creisle
closed
4 years ago
0
Update issue templates
#221
creisle
closed
4 years ago
0
Feature/issue 216 GitHub actions
#220
creisle
closed
4 years ago
0
Use bare asserts in tests
#219
creisle
opened
4 years ago
0
Use markdown files for building docs
#218
creisle
closed
4 years ago
0
Bugfix/issue 213 bnd non trans
#217
creisle
closed
4 years ago
0
Use github Actions for running tests
#216
creisle
closed
4 years ago
0
refactor(convert): split tools into multiple files
#215
creisle
closed
4 years ago
3
Breakdancer input inquiry
#214
moldach
opened
4 years ago
5
Error from Manta input
#213
moldach
closed
4 years ago
8
Trouble running full Mavis tutorial on SLURM
#212
moldach
closed
4 years ago
4
add sniffles test data for convert test
#211
oneillkza
closed
3 years ago
1
Add support for long-read bams (genome)
#210
oneillkza
opened
4 years ago
2
Feature/issue 208 svim sniffles vcf input
#209
oneillkza
closed
4 years ago
0
Add support for svim and sniffles vcf as input
#208
oneillkza
opened
4 years ago
5
generate_ensembl_json.py
#207
mattdoug604
closed
4 years ago
8
svict compatibility
#206
arnavaz
opened
4 years ago
7
Issue generating the annotations from Ensembl
#205
moldach
closed
4 years ago
9
Failed job from Mini Tutorial with no CRASH report in the schedule output
#204
moldach
closed
4 years ago
3
Feature/convenience orientation methods
#203
creisle
closed
4 years ago
0
Feature/run black
#202
creisle
closed
4 years ago
0
Add option for standardized VCF output
#201
torchij
opened
4 years ago
2
Question regarding use of MAVIS
#200
oalavijeh
closed
3 years ago
2
v2.2.6 scope review 2
#199
calchoo
closed
5 years ago
0
bump version in setup
#198
calchoo
closed
5 years ago
0
v2.2.6 scope review
#197
calchoo
closed
5 years ago
0
Issue #195: Restore the aliases to be a list not a single string
#196
creisle
closed
5 years ago
0
dash being inserted between letters in gene names while annotating with ncrna file
#195
alexjfortuna
closed
5 years ago
4
Bugfix/add clustering tests
#194
creisle
closed
5 years ago
0
v2.2.5 scope review
#193
creisle
closed
5 years ago
0
Feature/issue 188 update gene annotations
#192
creisle
closed
5 years ago
0
Bugfix/annotation reading
#191
calchoo
closed
5 years ago
0
Help Using Limited Dataset
#190
MDisyak
closed
4 years ago
1
clustering producing invalid rearrangement
#189
calchoo
closed
5 years ago
1
Updating Gene Annotations
#188
alexjfortuna
closed
5 years ago
9
Release 2.2.4 scope review
#187
calchoo
closed
5 years ago
0
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