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bihealth
/
sodar-server
SODAR: System for Omics Data Access and Retrieval
https://github.com/bihealth/sodar-server
MIT License
14
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Update REST API versioning for SODAR Core v1.0
#1936
mikkonie
closed
2 months ago
1
Grant contributors and guests read access to all landing zones within project
#1935
mikkonie
opened
8 months ago
0
Grant owners and delegates iRODS read/write access to contributor zones
#1934
mikkonie
opened
8 months ago
0
Cleanup and prepare v0.15.0
#1933
mikkonie
closed
3 months ago
1
IGV session merging opens a new session
#1932
mikkonie
opened
8 months ago
3
Add documentation for Cyberduck iRODS access
#1931
sellth
closed
8 months ago
1
Upgrade dependencies for v0.15.0
#1930
mikkonie
closed
3 months ago
1
Merge v0.14.2 release
#1929
mikkonie
closed
8 months ago
0
Source cell editing not working in assay table after row insert
#1928
mikkonie
closed
8 months ago
2
Render pooled/split rows on row insert in sheet editor
#1927
mikkonie
opened
8 months ago
0
Duplicate rows created on ISA-Tab export when splitting with unnamed data files
#1926
mikkonie
opened
8 months ago
1
IGV omit setting defaults not correctly set on project creation
#1925
mikkonie
closed
8 months ago
1
Rename get_igv_omit_override(), refactor use
#1924
mikkonie
closed
8 months ago
1
Add glob pattern and path support for SHEETS_IGV_OMIT_*
#1923
mikkonie
closed
8 months ago
1
Upgrade to django-sodar-core v1.0
#1922
mikkonie
closed
2 months ago
5
Handle missing family column in germline study cache update
#1921
mikkonie
closed
8 months ago
4
Add additional functionality to IGV omit patterns for VCF/BAM/CRAM files
#1920
mikkonie
closed
8 months ago
1
Add optional detailed landing zone taskflow output
#1919
mikkonie
opened
8 months ago
0
Allow setup behind reverse proxy #1917
#1918
HaraldWilhelmi
closed
8 months ago
0
Allow setup behind reverse proxy
#1917
HaraldWilhelmi
closed
8 months ago
1
Add landingzones taskflow task tests
#1916
mikkonie
closed
2 months ago
1
Added settings needed for reverse proxy setup
#1915
HaraldWilhelmi
closed
8 months ago
1
Germline study app helper used in cancer study app plugin tests
#1914
mikkonie
closed
8 months ago
1
Combine IrodsDataRequestModifyMixin timeline helpers
#1913
mikkonie
closed
9 months ago
1
Add extra data to IrodsDataRequest create/update timeline events
#1912
mikkonie
closed
9 months ago
1
Process name editing not enabled by default when adding new row in sheet editor
#1911
mikkonie
closed
9 months ago
1
Add landing zone taskflow queue?
#1910
mikkonie
opened
9 months ago
3
Project lock failure can update status of finished landing zone with rapid request spamming
#1909
mikkonie
closed
8 months ago
1
Add CRAM file support for IGV in study plugins
#1908
mikkonie
closed
8 months ago
2
Review irodsbackend API and session handling in taskflowbackend
#1907
mikkonie
opened
9 months ago
1
Uncaught exceptions in SetAccessTask
#1906
mikkonie
closed
9 months ago
1
Crash in landing_zone_create flow with large project and create/restrict collections
#1905
mikkonie
closed
9 months ago
3
Process not linked to existing node by name when adding new row in sheet editor
#1904
sellth
closed
8 months ago
5
Refactor IrodsStatisticsAjaxView and related JQuery
#1903
mikkonie
closed
9 months ago
1
Landing zone status updating not working in project details card
#1902
mikkonie
closed
9 months ago
1
Add taskflowbackend settings to siteinfo
#1901
mikkonie
closed
9 months ago
1
Increase default taskflow iRODS connection timeout
#1900
mikkonie
closed
9 months ago
1
Upgrade to django-sodar-core v0.13.4
#1899
mikkonie
closed
9 months ago
1
Add landing zone counts by status type in siteinfo
#1898
mikkonie
closed
9 months ago
1
Update readthedocs setup for building manual
#1897
mikkonie
closed
9 months ago
2
Sheet creation error from slashes in investigation title
#1896
mikkonie
closed
9 months ago
2
Add assay based access control to sample sheet data
#1895
mikkonie
opened
9 months ago
0
Timeline status update may fail on landing zone deletion
#1894
mikkonie
opened
9 months ago
3
File potentially lost if iRODS connection times out during landing zone moving
#1893
mikkonie
opened
9 months ago
0
Properly enable superuser landing zone controls for locked zones
#1892
mikkonie
opened
9 months ago
0
Validate and sanitize IRODS_ROOT_PATH in IrodsAPI.get_root_path()
#1891
mikkonie
closed
9 months ago
1
Use get_root_path() consistently within IrodsAPI
#1890
mikkonie
closed
9 months ago
1
Invalid alternative root path forming in IrodsAPI.get_path()
#1889
mikkonie
closed
9 months ago
1
Hardcoded path length in landing_zone_move flow
#1888
mikkonie
closed
9 months ago
1
Allow using "limit" in get_objs_recursively() if md5 files are included
#1887
mikkonie
opened
9 months ago
1
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