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mosaik-aligner
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potential issue with ASCII offset and FASTQ files?
#87
GoogleCodeExporter
opened
8 years ago
2
Mosaikbuild fails to process PE SOLiD reads.
#86
GoogleCodeExporter
opened
8 years ago
1
JumpHash: Error writing output
#85
GoogleCodeExporter
opened
8 years ago
12
MosaikAligner has segmentation fault for solid pair-end reads
#84
GoogleCodeExporter
opened
8 years ago
1
SNP and indels from SAM
#83
GoogleCodeExporter
opened
8 years ago
3
Integer owerflow
#82
GoogleCodeExporter
opened
8 years ago
2
MosaikBuild: fail to build dat file from Homo_sapiens.GRCh37.60.dna.toplevel.fa.gz
#81
GoogleCodeExporter
opened
8 years ago
1
MosaikDupSnoop is very slow with network storage
#80
GoogleCodeExporter
opened
8 years ago
0
base quality score limitation in MosaikText
#79
GoogleCodeExporter
opened
8 years ago
8
MosaikSort: restitch serialized alignments:Segmentation fault
#78
GoogleCodeExporter
opened
8 years ago
2
MosaikBuild deletes 20% of reads randomly
#77
GoogleCodeExporter
closed
8 years ago
12
colorspace conversion with mosaikbuild fails
#76
GoogleCodeExporter
closed
8 years ago
5
Asymmetric result for split read alignments
#75
GoogleCodeExporter
opened
8 years ago
9
MosaikText does not generate MD tag in SAM output
#74
GoogleCodeExporter
closed
8 years ago
7
MosaikTools compilation error
#73
GoogleCodeExporter
closed
8 years ago
2
MosaikBuild ERROR with SOLiD data, The lengths of bases(49) and qualities(50) of Read didn't match.
#72
GoogleCodeExporter
closed
8 years ago
1
MosaikBuild
#71
GoogleCodeExporter
opened
8 years ago
1
MosaikText conversion to .bed file is 1-based and should be 0-based
#70
GoogleCodeExporter
closed
8 years ago
1
BAM/SAM output clipping is not identified in Cigar string
#69
GoogleCodeExporter
opened
8 years ago
3
SNPs coordination in *.gff file
#68
GoogleCodeExporter
closed
8 years ago
3
Problem aligning 454 reads to short (~8kb or less) assembly
#67
GoogleCodeExporter
closed
8 years ago
2
MosaikSort hangs.
#66
GoogleCodeExporter
opened
8 years ago
2
MosaikBuild ERROR: The mate1 read name did not match the mate2 read name. Resynchronization support needs to be implemented.
#65
GoogleCodeExporter
closed
8 years ago
5
is there any way to analyze .bam alignment file using gigaBayes?
#64
GoogleCodeExporter
closed
8 years ago
1
question about MosaikSort
#63
GoogleCodeExporter
opened
8 years ago
0
A position was specified that is larger than the jump positions database
#62
GoogleCodeExporter
opened
8 years ago
0
MosaikAligner creates alignments that are incompatible with MosaikText
#61
GoogleCodeExporter
opened
8 years ago
0
Error with MosaikBuild reading FASTQ files with an empty line at the end of the file
#60
GoogleCodeExporter
opened
8 years ago
2
MosaikAlign: ERROR: Found a gap in both the reference sequence and query sequence.
#59
GoogleCodeExporter
opened
8 years ago
0
MosaikSort never terminates
#58
GoogleCodeExporter
opened
8 years ago
2
Bug(?) in AlignmentRead.cpp
#57
GoogleCodeExporter
opened
8 years ago
0
-rur option corrupts the quality line
#56
GoogleCodeExporter
opened
8 years ago
1
-rur option corrupts the quality line
#55
GoogleCodeExporter
closed
8 years ago
1
Error when merging base space alignment with colour space alignment
#54
GoogleCodeExporter
opened
8 years ago
0
MosaikAligner
#53
GoogleCodeExporter
opened
8 years ago
0
ERROR: Unable to initialize the uncompressed FastLZ buffer (Read).
#52
GoogleCodeExporter
opened
8 years ago
1
MosaikAssembler, writing assembly header ERROR
#51
GoogleCodeExporter
opened
8 years ago
1
MosaikSort cannot run!!!
#50
GoogleCodeExporter
opened
8 years ago
2
MosaikAligner error with memory?
#49
GoogleCodeExporter
opened
8 years ago
0
MosaikText fails to compile with intel 11.1
#48
GoogleCodeExporter
opened
8 years ago
4
MosaikBuild: The procedure entry point ?_Xmem@tr1@@YAXXZ could not be located in the dynamic link library MSVCP90.dII
#47
GoogleCodeExporter
opened
8 years ago
1
MosaikCoverage: ERROR: Tried to write past the end of the coverage array
#46
GoogleCodeExporter
opened
8 years ago
0
MosaikSort looses all non-unique reads during sorting when using -a all|multi|single in MosaikAligner
#45
GoogleCodeExporter
opened
8 years ago
1
Error while starting MosaikBuild in Windows
#44
GoogleCodeExporter
opened
8 years ago
0
Unclear Gigabayes 0utput
#43
GoogleCodeExporter
closed
8 years ago
1
"Write Statistics to Parsable File or Stddout w/ Status in stderr"
#42
GoogleCodeExporter
opened
8 years ago
2
unaligned reads
#41
GoogleCodeExporter
opened
8 years ago
3
MosaikMerge Segmentation Fault
#40
GoogleCodeExporter
opened
8 years ago
1
Weird alignments
#39
GoogleCodeExporter
opened
8 years ago
0
error during Mosaik Aligner execution
#38
GoogleCodeExporter
opened
8 years ago
0
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