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fritzsedlazeck
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SURVIVOR
Toolset for SV simulation, comparison and filtering
MIT License
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SURVIVOR always skipping 1 vcf file
#220
Anees-caas
opened
4 days ago
0
merge output shows no SV
#219
Anees-caas
closed
1 week ago
1
Index the SURVIVOR VCF file
#218
ywzhang071394
opened
1 week ago
0
mangled header
#217
tzvi909
opened
2 weeks ago
1
SURVIVOR merge is resulting in a lot of missing data, can I treat them as 0/0?
#216
qizhengyang2017
opened
3 weeks ago
0
filtering normal SV from tumor SV
#215
mdiaz09
closed
4 months ago
6
Problem with the Compilation
#214
rl4940
closed
4 months ago
2
Bug found: SV LEN value cutted
#213
leone93
opened
5 months ago
0
How to merge these columns following it from SURVIVOR merge result, and gain the Paragraph software input file
#212
HuTaoJiaZiAckerman
opened
5 months ago
0
about the output file, which file does it come from?
#211
Davidseye
opened
6 months ago
0
Clarification on derivation of SV length and type
#210
olivia-gc
opened
6 months ago
0
I call it "Nested merge"
#209
HuTaoJiaZiAckerman
opened
6 months ago
0
simreads endless runtime
#208
bjhunt-git
opened
6 months ago
0
Incorrect SVLEN for translocations in VCF file
#207
ethering
opened
6 months ago
0
SURVIVOR simSV - number of SVs doesn't correspond to parmas file
#206
ethering
opened
7 months ago
0
insertions.fa contains no insertion sequences
#205
ethering
opened
7 months ago
3
Merging UKB SV Files
#204
GHawkes93
opened
8 months ago
1
Inaccurate Chain Orientation in Survivor SV Results Merging
#203
zhaowsong
opened
9 months ago
0
Incorrect zero-based VCF file
#202
ethering
opened
9 months ago
3
no read support or mapping quality info in VCF
#201
heidihyang
opened
9 months ago
1
issue with merging sample vcfs already merged by calls from different programs
#200
heidihyang
closed
10 months ago
1
Not able to merge insertions
#199
beantkapoor786
opened
1 year ago
5
merge error
#198
Qijie0615
opened
1 year ago
0
Compatability with Duet
#197
mzwaig
opened
1 year ago
0
INS POS!=END
#196
jasonbhn
opened
1 year ago
0
convertAssemblytics and vcftobed issue
#195
vmukhina
opened
1 year ago
0
Does SURVIVOR work for mobile element insertions?
#194
RSWilson1
opened
1 year ago
0
simSV bed output explanation of DEL and INS position
#193
charliechen912ilovbash
closed
1 year ago
0
simreads in fastq format
#192
charliechen912ilovbash
closed
1 year ago
0
Expected DR field
#191
Akazhiel
opened
1 year ago
2
Fix FORMAT fields for SNP variant records
#190
Krannich479
opened
1 year ago
1
VCF header fields missing
#189
Krannich479
opened
1 year ago
3
Are the variants normalized?
#188
Krannich479
closed
1 year ago
1
definition of some parameters when simulate SV
#187
charliechen912ilovbash
closed
1 year ago
2
Losing SV calls when merging files
#186
leonvanmierlo
opened
1 year ago
1
error merging vcfs
#185
msubirana
closed
6 months ago
0
Simulating SV in PacBio reads
#184
priyambial123
opened
1 year ago
6
Merge vcf
#183
priyambial123
opened
1 year ago
2
vcftobed conversion
#182
priyambial123
opened
1 year ago
0
'TRA' in bed2vcf
#181
riasc
closed
1 year ago
2
about the result of SURVIVOR
#180
xiaohuli-45
opened
1 year ago
0
The INS is not merged.
#179
wangyzh
opened
1 year ago
0
make union
#178
lmanchon
opened
1 year ago
2
simreads long runtime
#177
weilu1998
opened
1 year ago
2
Segmentation fault (core dumped) during SURVIVOR merge
#176
sachingadakh
opened
1 year ago
7
NUlls for sample names after merging VCFs
#175
maxineliu
closed
1 year ago
5
INFO Field
#174
Akazhiel
opened
1 year ago
0
SURVIVOR with SNP calls?
#173
markdunning
opened
1 year ago
2
SURVIVOR stats not working with Sniffles2 output
#172
tuannguyen8390
closed
1 year ago
2
SURVIVOR convertAssemblytics, issue for "Min size to keep"
#171
Jhuang90
closed
2 years ago
2
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