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fritzsedlazeck
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SURVIVOR
Toolset for SV simulation, comparison and filtering
MIT License
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Deletion calls with positive SVLEN
#165
milesandersonmn
opened
2 years ago
0
the location is changing when merge different software SVs
#164
zhoudreames
closed
1 year ago
2
SURVIVOR didn't merge all SVs into output vcf
#163
pxchen110
opened
2 years ago
2
Enquiry about merge arguments
#162
yangyxt
opened
2 years ago
1
SURVIVOR merge run completes immediately without output or error message
#161
NazaninPA
closed
2 years ago
0
SURV only printing SV from one caller when SVTYPE is different from different callers
#160
tkoganti
opened
2 years ago
1
Invalid END?
#159
bbimber
opened
2 years ago
0
gzip inputs?
#158
bbimber
opened
2 years ago
2
SUPP_VEC tag question
#157
ahishsujay
closed
2 years ago
0
Question about merging
#156
NstVasileva
closed
2 years ago
0
Prioritization of ID in merged VCF
#155
pblaney
opened
2 years ago
0
different results for stats vs filtered
#154
mattheatley
opened
2 years ago
0
Problems on SURVIVOR merge
#153
Ceonham
opened
2 years ago
3
Read SV Length from DEB if present
#152
gariem
closed
1 year ago
0
Plotting the comparison of multiple input VCF files after merging shows only coincidental cases
#151
dKlee99
closed
2 years ago
2
SVLEN incorrectly printed
#150
pauline-ng
opened
2 years ago
1
merge not working as expected
#149
kmurphy902
closed
2 years ago
3
SV simulation
#148
asylvz
opened
2 years ago
6
Merging multiple samples in one vcf
#147
ashamehta
closed
2 years ago
7
SURVIVOR not reporting DR
#146
Akazhiel
opened
3 years ago
3
merge vcf
#145
pengyan19
opened
3 years ago
2
details of merge options
#144
edg1983
opened
3 years ago
13
Issue merging SVs within the same caller
#143
wbooker
opened
3 years ago
1
small changes in simSV: Avoiding mutations in N positions & make SNP positions in the printed VCF as 1-based & SAMPLE in header
#142
sinamajidian
closed
3 years ago
0
small changes in simSV: Avoiding mutations in N positions & make SNP positions in the printed VCF as 1-based
#141
sinamajidian
closed
3 years ago
0
The detailed merging process
#140
charliechen912ilovbash
opened
3 years ago
0
merging svaba
#139
anoronh4
opened
3 years ago
2
fail to simulate nested SVs like INV_del or INV_dup
#138
Jingwen7
closed
3 years ago
8
reciprocal overlap doesn't work
#137
am8265
opened
3 years ago
0
About SURVIVOR merge parameter
#136
Xuelei-Dai
opened
3 years ago
2
behavior of SURVIVOR merge on multiple samples from multiple callers
#135
danrlu
opened
3 years ago
0
SURVIVOR merge not working
#134
cccnrc
closed
3 years ago
2
Merge SV having position -1
#133
cagaser
opened
3 years ago
1
Merge (not consensus) of two VCFs
#132
ikeadeshina
opened
4 years ago
0
compMUMMer issue
#131
jiadong324
opened
4 years ago
0
vcftobed problem
#130
hygine
opened
4 years ago
1
Running into this issue during make
#129
skatragadda-nygc
closed
4 years ago
2
SURVIVOR convertAssemblytics problem
#128
MehmetGoktay
closed
4 years ago
3
sv merge problem
#127
hygine
opened
4 years ago
14
Can SURVIVOR work with vcfs without header?
#126
astulaaa
closed
4 years ago
1
How to interpret figures and potential error in output from VennDiagram
#125
moldach
closed
4 years ago
2
Issue generating pairwise comparison matrix
#124
moldach
closed
4 years ago
2
SURVIVOR merge
#123
Caro-Ca
closed
4 years ago
1
SURVIVOR bedtovcf conversion start position indexing
#122
Caro-Ca
closed
4 years ago
9
#error This file requires compiler and library support
#121
Caro-Ca
closed
4 years ago
4
Intrachromosomal BND to INV type?
#120
alsanju
opened
4 years ago
4
Add an optional arg to CLI to init simulations using a seed
#119
arnikz
opened
4 years ago
0
Is it possible to merge two multisample VCFs ?
#118
rozaimirazali
closed
4 years ago
1
SURVIVOR genComp outputs an empty matrix file
#117
astulaaa
closed
4 years ago
2
Coordinates of merged SVs
#116
Madelinehazel
closed
4 years ago
2
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