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microbiomedata
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mg_annotation
Metagenome Annotation Workflow
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IMG 5.3 update - databases
#37
aclum
opened
1 week ago
1
annotation update to 5.3 -genomad
#36
aclum
opened
1 week ago
0
rfam memory and jaws warnings
#35
kaijli
closed
1 month ago
0
removed crt duplicate outputs
#34
kaijli
closed
2 months ago
0
added stats.json to output file list
#33
kaijli
closed
2 months ago
0
Adding wdl linter github action
#32
aclum
closed
2 months ago
1
issue with crt.wdl
#31
aclum
closed
2 months ago
0
add github action to run wdl linter
#30
aclum
closed
2 months ago
0
v1.0 with mapping
#29
kaijli
closed
2 months ago
1
Mapping - basic changes
#28
kaijli
closed
3 months ago
3
Mapping
#27
kaijli
closed
3 months ago
1
update product mapping files to a specific path
#26
chienchi
closed
6 months ago
0
update product mapping files
#25
aclum
closed
6 months ago
8
add support for Contig Mapping File
#24
aclum
closed
3 months ago
10
update-v1
#23
mflynn-lanl
closed
2 months ago
10
19 lineage scaffold
#22
Michal-Babins
closed
1 year ago
0
added support for relase management through github actions
#21
Michal-Babins
closed
1 year ago
0
Create_releases
#20
Michal-Babins
closed
2 months ago
1
add scaffold lineage file to wdl outputs
#19
aclum
closed
1 year ago
4
Werkflow to master branch for annotation
#18
Michal-Babins
closed
1 year ago
0
update CRT to pull form public repo
#17
aclum
closed
1 year ago
4
Update to new version of img-nr database
#16
aclum
closed
1 year ago
3
CRT 1.8.4, prodigal patch, Dockerfile updates for public img-omics repo
#15
aclum
closed
1 year ago
2
img annotation 5.1.14 updates
#14
aclum
closed
1 year ago
1
Update annotation workflow to sync with JGI annotation version 5.1
#13
aclum
closed
1 year ago
2
5.1 sync
#12
aclum
closed
1 year ago
0
Move default_runtime_attributes specified in the options.json file to the wdl task level
#11
aclum
closed
1 year ago
1
example inputs.json is not valid
#10
aclum
closed
1 year ago
1
added support for triplets
#9
Michal-Babins
opened
2 years ago
0
Analyze and resolve issue with missing annotation outputs for IMG
#8
ssarrafan
closed
9 months ago
8
Add outputs and adjust split size
#7
scanon
opened
2 years ago
1
copy output files
#6
mflynn-lanl
closed
1 year ago
3
Workflows - Test small data sets for workflows (mg_annotation)
#5
ssarrafan
closed
3 years ago
7
Workflows - Test large data sets for workflows (mg_annotation)
#4
ssarrafan
closed
3 years ago
4
Update docs
#3
hubin-keio
closed
3 years ago
0
Update README.md database license information
#2
kltm
closed
3 years ago
0
WIP: Add documentation and example data
#1
scanon
closed
4 years ago
0