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monarch-initiative
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mondo-ingest
Coordinating the mondo-ingest with external sources
https://monarch-initiative.github.io/mondo-ingest/
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DO NOT MERGE - EMC: test build
#674
joeflack4
opened
4 days ago
0
Data build to merge into main
#673
twhetzel
opened
4 days ago
0
Upgrade externally managed content: `DOWNLOAD_EXTERNAL=true`
#672
joeflack4
opened
4 days ago
0
Synonym sync: acronym case exception
#671
joeflack4
opened
1 week ago
0
`--dry-run` fails for `build-mondo-ingest`
#670
joeflack4
opened
1 week ago
0
`develop` build - 2024-09-23
#669
joeflack4
closed
4 days ago
1
Synonym sync: Abbreviation exclusions
#668
joeflack4
closed
1 week ago
1
Add metrics JSON to `.gitignore`?
#667
joeflack4
opened
1 week ago
0
DO NOT MERGE: Synonyms getting dropped when making component - build
#666
joeflack4
closed
1 week ago
1
Synonyms getting dropped when making component
#665
joeflack4
closed
1 week ago
0
DO NOT MERGE: `OMO:0003000` -> `MONDO:ABBREVIATION` - build
#664
joeflack4
closed
1 week ago
1
`OMO:0003000` -> `MONDO:ABBREVIATION`
#663
joeflack4
closed
1 week ago
0
Pronto reqs
#662
joeflack4
opened
1 week ago
0
Create a mondo imports `.owl`?
#661
joeflack4
opened
1 week ago
0
Grouping: `requirements.txt`
#660
joeflack4
opened
1 week ago
0
Rename requirements file: apple-silicon -> arm64
#659
joeflack4
opened
1 week ago
0
Drop `requirements.txt` or rename to `requirements-x86-64.txt`
#658
joeflack4
opened
1 week ago
0
Keep `requirements.txt` in sync w/ ODK
#657
joeflack4
opened
1 week ago
0
Synonyms getting dropped when making component
#656
joeflack4
closed
1 week ago
2
Build on `develop` and `main` fails - undeclared synonym type: http://purl.obolibrary.org/obo/mondo#abbreviation
#655
twhetzel
opened
2 weeks ago
5
DO NOT MERGE - Docs goals updates - build
#654
joeflack4
opened
2 weeks ago
0
Build - Sep 2024 (second iteration)
#653
twhetzel
closed
2 weeks ago
0
Synonym sync: Abbreviation exclusions
#652
joeflack4
opened
3 weeks ago
0
Build - Sep 2024 files
#651
twhetzel
closed
3 weeks ago
0
Add exclusion rules to mondo-excluded-values.yml
#650
matentzn
opened
1 month ago
0
DO NOT MERGE - Replace `bioregistry` dependency with `curies` - build
#649
joeflack4
closed
2 weeks ago
0
Replace `bioregistry` dependency with `curies`
#648
joeflack4
closed
1 week ago
0
Ensure `robot remove --trim` usage is correct for all sources
#647
joeflack4
opened
1 month ago
0
Add draft reference for excluded values
#646
matentzn
closed
1 month ago
2
Bugfix: Mondo artefacts refresh
#645
joeflack4
closed
1 month ago
0
NEVER MERGE: Externalclingenefo DATA BUILD
#644
matentzn
closed
1 month ago
1
DO NOT MERGE Build refactor git refresh
#643
matentzn
closed
1 month ago
1
Problematic exclusions codestyle updates
#642
joeflack4
closed
1 month ago
0
account for mirror source content with rdfs:label or skos:prefLabel
#641
twhetzel
closed
1 month ago
0
DO NOT MERGE - Feature branch build for issue-638
#640
twhetzel
closed
1 month ago
1
Synchronization: Synonyms - `synonym_type`
#639
joeflack4
closed
1 month ago
4
Update problematic_exclusions.py due to error with icd11.foundation
#638
twhetzel
closed
1 month ago
1
TEST Build from main branch with code updates to icd11 component goal and problematic exclusion script
#637
twhetzel
closed
1 month ago
1
DO NOT MERGE - `fatal: detected dubious ownership in repository` - build
#636
joeflack4
closed
1 month ago
1
DO NOT MERGE - Bug fix: "ICD11 label not found" RuntimeError - build
#635
joeflack4
closed
1 month ago
2
Bug fix: ICD11 "label not found" `RuntimeError`
#634
joeflack4
closed
1 month ago
2
`fatal: detected dubious ownership in repository`
#633
joeflack4
closed
1 month ago
12
`fatal: detected dubious ownership in repository`
#632
joeflack4
closed
1 month ago
1
TEST Data build fix-ncit-synonyms feature branch
#631
twhetzel
closed
1 month ago
0
Benign attempt to resolve strange `LF` --> `CRLF` issue on Joe's machine
#630
joeflack4
opened
1 month ago
4
Data Build to (commit) merge into main
#629
twhetzel
closed
1 month ago
1
Upgrade externally managed content
#628
matentzn
opened
1 month ago
6
Migration: clearly distinguish which disease ID a specific Mondo ID _was sourced_ from
#627
matentzn
opened
1 month ago
6
Migration table: add provenance to definitions!
#626
matentzn
opened
1 month ago
4
Synchronising OMIM Included terms correctly
#625
matentzn
opened
1 month ago
1
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