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mrc-ide
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helios
Simulating far UVC for pathogen control
https://mrc-ide.github.io/helios/
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joint allocation fix to not include households is fine but messy
#124
cwhittaker1000
opened
2 weeks ago
0
clarify parameter names
#123
cwhittaker1000
opened
2 weeks ago
0
Add joint allocation and size of locations
#122
athowes
closed
2 weeks ago
1
Model speedup
#121
cwhittaker1000
closed
3 weeks ago
0
More flexible output formats for reports
#120
athowes
opened
1 month ago
0
another merge to get everything caught up don't judge me pls
#119
cwhittaker1000
closed
1 month ago
0
getting everything merged into one place for the report
#118
cwhittaker1000
closed
1 month ago
0
updating so that doc has access to changes since report PR started
#117
cwhittaker1000
closed
1 month ago
0
charlie's branch off of the main july report branch
#116
cwhittaker1000
closed
1 month ago
0
merge main into my tester branch for specifying all disease state initial conditions
#115
cwhittaker1000
closed
1 month ago
0
[DEPRECATED] specification of all disease state initial conditions (plus a small bug fix)
#114
cwhittaker1000
closed
1 month ago
1
Far UVC coverage for leisure venues?
#113
athowes
opened
1 month ago
1
Add message about setting far UVC for unattended locations?
#112
athowes
closed
1 month ago
3
Setting specific riskiness tom merge v2
#111
cwhittaker1000
closed
1 month ago
0
merging in Tom's edits into the main setting-specific-riskiness branch
#110
cwhittaker1000
closed
1 month ago
0
July report update for Blueprint
#109
athowes
closed
1 month ago
0
Blueprint old edits
#108
athowes
opened
1 month ago
0
[DEPRECATED] July report for Blueprint
#107
athowes
closed
1 month ago
0
Targetting locations by location-specific riskiness
#106
athowes
opened
1 month ago
0
Fix to `run_simulations_from_table()`
#105
athowes
closed
1 month ago
1
Pass `R CMD CHECK`
#104
athowes
opened
1 month ago
0
`create_variables` return
#103
athowes
opened
1 month ago
0
Solutions to overshooting coverage?
#102
athowes
opened
1 month ago
0
adding in setting-specific riskiness
#101
cwhittaker1000
closed
1 month ago
3
Enable passing in empirical data to bootstrap
#100
athowes
opened
2 months ago
0
Issue 83 (partial): Add USA schools
#99
athowes
closed
1 month ago
2
updating workplace generation so it matches new *location*_distribution_generation & *location*_distribution_country pattern
#98
cwhittaker1000
closed
1 month ago
2
integrating USA data into household and age group generation
#97
cwhittaker1000
closed
1 month ago
5
Failing unit test due to no `as_tibble` function
#96
athowes
opened
2 months ago
0
Added Pathogen Archetypes
#95
tbreweric
closed
2 months ago
0
Agree on notation for far UVC
#94
athowes
opened
3 months ago
3
Issue 72: Further far UVC install strategies
#93
athowes
closed
1 month ago
1
Add column names and explanations to run_simulation() Roxygen2 documentation
#92
tbreweric
opened
3 months ago
1
Incidence Rendering
#91
tbreweric
closed
3 months ago
7
more detailed representation of physical space
#90
cwhittaker1000
opened
3 months ago
2
include functionality to model "pathogen archetypes"
#89
cwhittaker1000
closed
2 months ago
3
add in setting-specific variation in infectiousness/riskiness
#88
cwhittaker1000
closed
1 month ago
1
add in individual-level variation in infectiousness
#87
cwhittaker1000
opened
3 months ago
1
explicitly capturing overdispersion in the offspring distribution
#86
cwhittaker1000
opened
3 months ago
1
add in explicit representation of hospitalisations and deaths
#85
cwhittaker1000
opened
3 months ago
1
refine parameterisation of location-specific infection risk (the beta parameters)
#84
cwhittaker1000
closed
1 month ago
3
parameterise the model explicitly for the USA
#83
cwhittaker1000
closed
1 month ago
8
Consider different file location for `blueprint_demo_May_raw_outputs`
#82
athowes
closed
3 months ago
3
Use usethis::use_pkgdown_github_pages
#81
athowes
closed
3 months ago
0
Running simulations using a table/dataframe of parameter values
#80
tbreweric
closed
3 months ago
7
external FOI functionality in to stabilise and facilitate simulation of endemic pathogens
#79
cwhittaker1000
closed
3 months ago
2
Blueprint Biosecurity Initial Report
#78
cwhittaker1000
closed
3 months ago
1
Suggested changes for report
#77
athowes
closed
3 months ago
2
Issue 75: Fix report rendering issues
#76
athowes
closed
3 months ago
0
Fix rendering issues in HTML vignette
#75
athowes
closed
3 months ago
0
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