mrc-ide helios issues - Githubissues

mrc-ide / helios

Simulating far UVC for pathogen control

https://mrc-ide.github.io/helios/

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joint allocation fix to not include households is fine but messy

#124 cwhittaker1000 opened 3 months ago
0
clarify parameter names

#123 cwhittaker1000 opened 3 months ago
0
Add joint allocation and size of locations

#122 athowes closed 3 months ago
1
Model speedup

#121 cwhittaker1000 closed 3 months ago
0
More flexible output formats for reports

#120 athowes opened 3 months ago
0
another merge to get everything caught up don't judge me pls

#119 cwhittaker1000 closed 4 months ago
0
getting everything merged into one place for the report

#118 cwhittaker1000 closed 4 months ago
0
updating so that doc has access to changes since report PR started

#117 cwhittaker1000 closed 4 months ago
0
charlie's branch off of the main july report branch

#116 cwhittaker1000 closed 4 months ago
0
merge main into my tester branch for specifying all disease state initial conditions

#115 cwhittaker1000 closed 4 months ago
0
[DEPRECATED] specification of all disease state initial conditions (plus a small bug fix)

#114 cwhittaker1000 closed 4 months ago
1
Far UVC coverage for leisure venues?

#113 athowes opened 4 months ago
1
Add message about setting far UVC for unattended locations?

#112 athowes closed 4 months ago
3
Setting specific riskiness tom merge v2

#111 cwhittaker1000 closed 4 months ago
0
merging in Tom's edits into the main setting-specific-riskiness branch

#110 cwhittaker1000 closed 4 months ago
0
July report update for Blueprint

#109 athowes closed 3 months ago
0
Blueprint old edits

#108 athowes opened 4 months ago
0
[DEPRECATED] July report for Blueprint

#107 athowes closed 4 months ago
0
Targetting locations by location-specific riskiness

#106 athowes opened 4 months ago
0
Fix to `run_simulations_from_table()`

#105 athowes closed 4 months ago
1
Pass `R CMD CHECK`

#104 athowes opened 4 months ago
0
`create_variables` return

#103 athowes opened 4 months ago
0
Solutions to overshooting coverage?

#102 athowes opened 4 months ago
0
adding in setting-specific riskiness

#101 cwhittaker1000 closed 4 months ago
3
Enable passing in empirical data to bootstrap

#100 athowes opened 5 months ago
0
Issue 83 (partial): Add USA schools

#99 athowes closed 4 months ago
2
updating workplace generation so it matches new *location*_distribution_generation & *location*_distribution_country pattern

#98 cwhittaker1000 closed 4 months ago
2
integrating USA data into household and age group generation

#97 cwhittaker1000 closed 4 months ago
5
Failing unit test due to no `as_tibble` function

#96 athowes opened 5 months ago
0
Added Pathogen Archetypes

#95 tbreweric closed 5 months ago
0
Agree on notation for far UVC

#94 athowes opened 5 months ago
3
Issue 72: Further far UVC install strategies

#93 athowes closed 4 months ago
1
Add column names and explanations to run_simulation() Roxygen2 documentation

#92 tbreweric opened 5 months ago
1
Incidence Rendering

#91 tbreweric closed 5 months ago
7
more detailed representation of physical space

#90 cwhittaker1000 opened 5 months ago
2
include functionality to model "pathogen archetypes"

#89 cwhittaker1000 closed 5 months ago
3
add in setting-specific variation in infectiousness/riskiness

#88 cwhittaker1000 closed 4 months ago
1
add in individual-level variation in infectiousness

#87 cwhittaker1000 opened 5 months ago
1
explicitly capturing overdispersion in the offspring distribution

#86 cwhittaker1000 opened 5 months ago
1
add in explicit representation of hospitalisations and deaths

#85 cwhittaker1000 opened 5 months ago
1
refine parameterisation of location-specific infection risk (the beta parameters)

#84 cwhittaker1000 closed 4 months ago
3
parameterise the model explicitly for the USA

#83 cwhittaker1000 closed 4 months ago
8
Consider different file location for `blueprint_demo_May_raw_outputs`

#82 athowes closed 5 months ago
3
Use usethis::use_pkgdown_github_pages

#81 athowes closed 5 months ago
0
Running simulations using a table/dataframe of parameter values

#80 tbreweric closed 5 months ago
7
external FOI functionality in to stabilise and facilitate simulation of endemic pathogens

#79 cwhittaker1000 closed 5 months ago
2
Blueprint Biosecurity Initial Report

#78 cwhittaker1000 closed 6 months ago
1
Suggested changes for report

#77 athowes closed 6 months ago
2
Issue 75: Fix report rendering issues

#76 athowes closed 6 months ago
0
Fix rendering issues in HTML vignette

#75 athowes closed 6 months ago
0