pachterlab kma issues - Githubissues

pachterlab / kma

Keep Me Around: Intron Retention Detection

GNU General Public License v2.0

28 stars 20 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Error 11 in running generate_introns.py

#28 edwardfu11 opened 1 year ago
0
kma-kallisto

#27 KevDonn opened 2 years ago
0
Another "newIntronRetention" error

#26 jfass closed 4 years ago
1
About what kma can do?

#25 zhengjiantao opened 5 years ago
1
Remove biopython dependency, use .fai indexing with pyfaidx

#24 mdshw5 opened 5 years ago
0
Error in generate_introns.py.

#23 zhengjiantao opened 5 years ago
2
--extend

#22 zhengjiantao opened 5 years ago
0
Does kma support kallisto?

#21 MySelvan opened 5 years ago
0
numerator && denominator

#20 BGIHENG opened 5 years ago
1
Error in "newIntronRetention"

#19 adamtongji opened 5 years ago
6
Installation failed

#18 immuneAI opened 6 years ago
1
error in hypothesis testing step in kea

#17 gupta567varun opened 6 years ago
2
Error 'KeyError:3'

#16 lynnyi opened 6 years ago
2
Question about --extend parameter

#15 lynnyi opened 6 years ago
1
can quantification by kallisto being supported?

#14 trptyrphe11 opened 7 years ago
4
documentation 404

#13 Jessime closed 7 years ago
1
newIntronRetention error

#12 trptyrphe11 closed 7 years ago
0
inner_join in newIntronRetention

#11 aldojongejan opened 7 years ago
0
Output of a new GTF file with IR events?

#10 jamespblloyd opened 7 years ago
0
error "object 'pvalue' not found" when using all_zc() R function

#9 rhugh-white opened 7 years ago
0
generate_introns.py different number of introns in introns.bed and intron_to_transcripts.txt

#8 fgypas opened 8 years ago
0
Pre-processing with generate_introns.py failing

#7 skasowitz opened 8 years ago
7
eXpress runs out of memory

#6 julsssen opened 8 years ago
2
couldn't see vignette after installation

#5 mambastats opened 8 years ago
1
Problem in R: computing dominator

#4 LiLey opened 8 years ago
2
HISAT2 - cufflinks

#3 vmanders opened 8 years ago
4
Install error on linux

#2 DrHale opened 9 years ago
2
dplyr and filters

#1 pimentel closed 9 years ago
1