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pierrepo
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PBxplore
A suite of tools to explore protein structures with Protein Blocks :snake:
https://pbxplore.readthedocs.org/en/latest/
MIT License
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17
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Add Zenodo and SH badge for code archives
#181
pierrepo
closed
3 years ago
4
Update CI badges
#180
HubLot
closed
3 years ago
10
Update citation with code archives
#179
pierrepo
closed
3 years ago
0
Update badge for CI
#178
pierrepo
closed
3 years ago
0
Add Zenodo badge
#177
pierrepo
closed
3 years ago
3
Update CI to GitHub Actions
#176
HubLot
closed
3 years ago
7
Fix few bugs and bump to v1.4.0
#175
gabrielctn
closed
3 years ago
12
Fix pytest
#174
gabrielctn
closed
4 years ago
0
new Weblogo library issue
#173
alexdb27
closed
3 years ago
1
Bumb the minimal MDAnalysis version required
#172
jbarnoud
opened
6 years ago
7
Add citation info
#171
pierrepo
closed
6 years ago
1
Link the paper and explain how to cite
#170
jbarnoud
closed
6 years ago
3
Add an example plot with RMSF and Neq superposed
#169
HubLot
closed
6 years ago
0
Pierre's and Hubert's affiliations are outdated on the README
#168
jbarnoud
closed
6 years ago
0
Two tests 'xfailed'
#167
pierrepo
closed
6 years ago
2
Mordernize the tests
#166
jbarnoud
closed
6 years ago
1
Conda update
#165
HubLot
closed
7 years ago
0
Fix the usage string of PBassign
#164
jbarnoud
closed
7 years ago
0
Remove gromacs word for trajectory and use more generic ones.
#163
HubLot
closed
7 years ago
0
Update installation doc
#162
pierrepo
closed
7 years ago
5
Update PBassign version
#161
pierrepo
closed
7 years ago
6
Fix display image notebook
#160
pierrepo
closed
7 years ago
0
Yet another update on the documentation
#159
HubLot
closed
7 years ago
1
Travis python 3.6
#158
HubLot
closed
7 years ago
0
Update license to BSD?
#157
pierrepo
closed
6 years ago
2
Update travis to build doc also for Python 3.x (up to 3.6)
#156
pierrepo
closed
7 years ago
7
Add example files for documentation
#155
pierrepo
closed
7 years ago
7
Remove remaining PBdata stuff
#154
HubLot
closed
7 years ago
2
Fix encoding issue with weblogo file (#152)
#153
HubLot
closed
7 years ago
1
PBstat does not generate weblogo anymore
#152
pierrepo
closed
7 years ago
8
Add a progress bar during PB assignment of a trajectory (#150)
#151
HubLot
closed
7 years ago
6
Missing progress in MD trajectory PBs assignment
#150
pierrepo
closed
7 years ago
1
Fix #148
#149
HubLot
closed
7 years ago
5
visualization functions fail when the first residue of the count matrix is not equal to 1
#148
HubLot
closed
7 years ago
2
Improve drawing of PBs map
#147
pierrepo
closed
7 years ago
4
PBstat with `--map` option crash when the number of residus is < 20
#146
HubLot
closed
7 years ago
3
Check PEP8 compliance
#145
pierrepo
closed
7 years ago
9
Handle production of NaN during angle calculations.
#144
HubLot
closed
7 years ago
5
Remove R clustering in main code, tests and doc
#143
pierrepo
closed
7 years ago
0
Fix weblogo weblogolib.SymbolColor/ColorGroup import
#142
pierrepo
closed
7 years ago
0
Matplotlib is a mandatory requirement
#141
pierrepo
closed
7 years ago
0
MDAnalysis as a mandatory requirement
#140
pierrepo
closed
7 years ago
0
Support of file extension .pdb.gz
#139
HubLot
closed
7 years ago
0
PBxplore from PyPI (v1.0) does not seem to read *.pdb.gz anymore
#138
pierrepo
closed
7 years ago
2
Add doc for PyPI release
#137
pierrepo
closed
7 years ago
2
Remove Clustering
#136
HubLot
closed
7 years ago
2
[WIP] Release Procedure
#135
HubLot
closed
7 years ago
1
compatibility check for weblogo versions
#134
HubLot
closed
7 years ago
4
Tests fail with he latest version of weblogo
#133
jbarnoud
closed
7 years ago
4
installation difficulties and PBxplore philosphy
#132
alexdb27
closed
6 years ago
2
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