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ruanjue
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wtdbg2
Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly
GNU General Public License v3.0
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Parameters setting problem
#121
Sparkle-27
closed
5 years ago
2
Parameters for 1G repetitive and heterozygous diploid genome
#120
swomics
closed
5 years ago
4
关于使用其他软件纠错后数据配合此软件组装的效果
#119
pengbo233
closed
5 years ago
3
truncated output, with no errors in log
#118
swomics
closed
5 years ago
5
Recommended parameters for coverage titration?
#117
adigenova
closed
5 years ago
2
How does one pronounce wtdbg2, and is there a preferred more usable name?
#116
oneillkza
closed
5 years ago
5
why do contig end?
#115
chklopp
closed
5 years ago
3
Expose -X and check return code
#114
lh3
closed
5 years ago
0
Perl launcher
#113
lh3
closed
5 years ago
1
wtpoa-cns segmentation fault
#112
kautto
closed
5 years ago
13
Suitable for very large genomes ？ 25Gb （100X coverage）
#111
luca-Wang
closed
5 years ago
3
find unused reads
#110
LipengKang
closed
5 years ago
2
Question: Recommended minimum coverage?
#109
mjmillerlab
closed
5 years ago
3
about the problem of wtdbg2 assembly
#108
wangzhongkai1
closed
5 years ago
10
v2.4 is much slower than v2.3 with large ONT, SQ data
#107
macarima
closed
5 years ago
10
--kbm-parts might cause incomplete slicing on kbm->reads
#106
eee4017
closed
5 years ago
1
PB human genome coverage upper limit?
#105
isantana-bio
closed
5 years ago
2
get original fastq from wtdbg read names (S)
#104
jacqgg
closed
5 years ago
1
split_seqs_2.pl needed
#103
yzs981130
closed
5 years ago
1
What can I use the dataset
#102
chen5864647
closed
5 years ago
2
What can I use the dataset
#101
chen5864647
closed
5 years ago
0
About the variable "num_index"
#100
CleverFat
closed
5 years ago
4
different result between version 2.3 and 2.4
#99
bjmiao
closed
5 years ago
2
wtpoa-cns polishing step
#98
crysclitheroe
closed
5 years ago
9
Remove only branching edges, but not the node itself
#97
gusevfe
closed
5 years ago
1
Large difference in total assembly size with PacBio error correction
#96
evolgen
closed
5 years ago
2
How to verify the correctness of wtdbg2 output
#95
CleverFat
closed
5 years ago
1
Suggestions for mixed ont+pacbio
#94
apredeus
closed
5 years ago
2
low coverage assembly suggestion
#93
LipengKang
closed
5 years ago
10
wtdbg2 stagnate at the sorting stage?
#92
xiaoyezao
closed
5 years ago
4
Bug or intended?
#91
FluorineDog
closed
5 years ago
4
Kmer distribution differences between raw reads and corrected reads
#90
zy041225
closed
5 years ago
2
Consenser reduces the expected genome size?
#89
harish0201
closed
5 years ago
8
assembly with "-B 384"
#88
bitcometz
closed
5 years ago
4
out of memory ?
#87
xiaoyezao
closed
5 years ago
1
suggestions on settings
#86
xiaoyezao
closed
5 years ago
6
error: Segmentation fault
#85
xiaoyezao
closed
5 years ago
3
run wtdbg2 with multiple nodes in cluster
#84
xiaoyezao
closed
5 years ago
1
where is the run_wtdbg_assembly.sh script?
#83
xiaoyezao
closed
5 years ago
1
Assembling short read
#82
Ivanbh214
closed
5 years ago
5
How can I run in Mac?
#81
emmannaemeka
closed
5 years ago
1
Reproducibility of results
#80
trichoptera
closed
5 years ago
2
Failed to create threads on SGE
#79
GeoMicroSoares
closed
5 years ago
1
Metagenome assembly recommendations?
#78
mikolmogorov
closed
4 years ago
8
Many erroneous 1-bp deletions
#77
iwohlers
closed
5 years ago
5
Genomesize
#76
trichoptera
closed
5 years ago
2
Suggestion for 3G repetitive plant genome assembly with high heterozygosity
#75
bitcometz
closed
5 years ago
7
Unstable wtpoa-cns ？
#74
bitcometz
closed
5 years ago
3
Support for local assembly?
#73
OscarAspelin
closed
5 years ago
1
Parameters for low-coverage ultra-long ONT reads
#72
glogsdon1
closed
5 years ago
1
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