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sjanssen2
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spike
NGS pipeline for SNV detection in tumor context
BSD 3-Clause "New" or "Revised" License
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Update 200325_NB552271_0006_AHHJLFBGXC_spike.csv
#252
vannguyenh
closed
1 year ago
1
Kb0046 c
#251
deyazoubi
closed
3 years ago
0
KB typo?
#250
sjanssen2
closed
4 years ago
1
adding missing samplesheets
#249
sjanssen2
closed
4 years ago
2
Work in Progress, do NOT merge! TCGA
#248
sjanssen2
opened
4 years ago
0
New s ss
#247
sjanssen2
closed
4 years ago
0
new sample sheet
#246
sjanssen2
closed
4 years ago
0
Tc
#245
deyazoubi
closed
3 years ago
0
Broken files on Hilbert
#244
deyazoubi
opened
4 years ago
0
Flow cells from 18.03.2020
#243
deyazoubi
opened
4 years ago
1
new sample sheet
#242
sjanssen2
closed
4 years ago
0
mean coverage
#241
deyazoubi
opened
4 years ago
1
slove unknown barcodes
#240
deyazoubi
closed
3 years ago
1
Picard's command line syntax is changing
#239
deyazoubi
opened
4 years ago
0
Flow cell 14.02.2020
#238
deyazoubi
opened
4 years ago
0
new demux sheet for 16S V4 EMP run: pax5 and cytokine project
#237
sjanssen2
closed
4 years ago
0
230120
#236
deyazoubi
closed
4 years ago
0
Fastqc multiqc
#235
deyazoubi
opened
4 years ago
1
Flow cells from 23.01.2020
#234
deyazoubi
opened
4 years ago
0
new sample sheet
#233
deyazoubi
closed
4 years ago
0
Ss 479 2
#232
deyazoubi
opened
4 years ago
0
new sample sheet
#231
deyazoubi
opened
4 years ago
0
Ss 487
#230
deyazoubi
opened
4 years ago
0
Flow cells from 32.01.2020
#229
deyazoubi
closed
4 years ago
0
Flow cells from 11.12.19
#228
deyazoubi
opened
4 years ago
1
bamstat install error
#227
deyazoubi
opened
4 years ago
1
sample sheet
#226
deyazoubi
closed
4 years ago
0
Nextseq Run
#225
deyazoubi
opened
4 years ago
0
flow cell 26 11 2019
#224
deyazoubi
opened
4 years ago
0
added -p {threads}
#223
sjanssen2
closed
4 years ago
0
pigz threads
#222
deyazoubi
opened
4 years ago
0
Fastqc All
#221
deyazoubi
closed
4 years ago
0
reference genome hg38?
#220
deyazoubi
opened
5 years ago
0
new capture kit V7
#219
deyazoubi
opened
5 years ago
1
targetdirectory for NextSeq
#218
deyazoubi
opened
5 years ago
0
Sample Processing Flowcell Nov14
#217
deyazoubi
opened
5 years ago
0
add new Fastqc rule
#216
deyazoubi
closed
4 years ago
2
add Fastqc call to rule all
#215
deyazoubi
closed
4 years ago
0
Fastqc and MULTIQC rule
#214
deyazoubi
opened
5 years ago
0
new project ETV6_RUNX1
#213
deyazoubi
opened
5 years ago
1
KB0046_c_t
#212
deyazoubi
opened
5 years ago
0
added a test for helper function _run2date
#211
sjanssen2
closed
5 years ago
0
return unvalid date?
#210
deyazoubi
opened
5 years ago
2
new sample sheet for the new project
#209
deyazoubi
opened
5 years ago
0
Ss 480
#208
deyazoubi
closed
4 years ago
0
I added new project to Sunpy, but i did not know how to find project_id number
#207
deyazoubi
closed
5 years ago
0
Etv6 runx1
#206
deyazoubi
closed
5 years ago
0
Sample Processing Flowcell Oct19
#205
deyazoubi
opened
5 years ago
0
Doc newproject
#204
sjanssen2
closed
5 years ago
0
two new samples sheet
#203
deyazoubi
closed
5 years ago
0
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