tseemann prokka issues - Githubissues

tseemann / prokka

:zap: :aquarius: Rapid prokaryotic genome annotation

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fix typos in README.md

#513 smsaladi closed 4 years ago
1
Annontating for both virus and bacteria

#512 nongiga opened 4 years ago
0
problem with tbl2asn

#511 tivdnbos closed 4 years ago
2
[Question] Only saving .faa file

#510 tivdnbos closed 4 years ago
1
Finding the right locustag

#509 vappiah opened 4 years ago
0
Argument "1.7.7" isn't numeric in numeric

#508 tseemann opened 4 years ago
19
Gene name from Mitochondria & NCBI annotation submission

#507 stemicha opened 4 years ago
1
mRNA created for misc_RNA or tRNA or RNA and reported as duplicated by the ENA validator

#506 Jeepee8820 opened 4 years ago
3
File is not readable non-empty FASTA file error

#505 Rob-murphys opened 4 years ago
2
HMM product modified to hypthetical proteins

#504 sxh1136 closed 4 years ago
1
Script for running Prokka

#503 Natashia695 closed 4 years ago
1
Fragmented gene annotations

#502 hoelzer opened 4 years ago
8
XMFA file format for mauve

#501 mattbird567 opened 4 years ago
0
--proteins option

#500 Vers4L closed 4 years ago
2
How to download the example files?

#499 swmuyu closed 4 years ago
1
Prokka GFF files incompatible

#498 mabouelk closed 4 years ago
3
no names for CDS

#497 valery-shap opened 4 years ago
5
Annotation of IS element from E. coli

#496 quocviet0908 closed 4 years ago
2
Number of ORFs

#495 EugeneKim76 closed 4 years ago
3
prokka-genbank_to_fasta_db error

#494 ramadatta opened 4 years ago
10
Speed up overlap lookup in CDS stage

#493 fluhus opened 4 years ago
0
Add --nogbk flag for skipping GeneBank output

#492 fluhus closed 4 years ago
1
Don't require entire BioPerl installation

#491 alanorth opened 4 years ago
0
Add note about minimum Perl version to README.md

#490 alanorth opened 4 years ago
0
missing -r operator in checking indexes

#489 telatin closed 4 years ago
1
conda installed prokka not working due to too old conda install tbl2asn

#488 Casperjamin closed 4 years ago
2
Can prokka be used for transcriptome annotation?

#487 PhoebeCc opened 4 years ago
6
Reference genome annotation

#486 ireneortega closed 4 years ago
1
rRNA not well annotated with Barrnap

#485 ireneortega opened 4 years ago
5
loop runs into path error

#484 TseWue closed 4 years ago
3
gbk file is incompatible with Biopython

#483 YiweiZhu opened 4 years ago
1
Adding The Virulence Factor Database to Prokka?

#482 djung0928 opened 4 years ago
2
Output KOs

#481 lijierr opened 4 years ago
2
Error message when opening .gff files in Artemis/ACT

#480 sarah27m closed 4 years ago
1
EC_number and gene don't match each other

#479 lijierr opened 4 years ago
0
Warning message related to prodigal

#478 HokyungSong opened 4 years ago
0
issue with brew install

#477 vjmorley closed 4 years ago
2
Prokka or biological meaning?

#476 jellila closed 4 years ago
1
tbl2asn disable by default

#475 blazejszczerba opened 4 years ago
1
Proposing a few changes

#474 fluhus opened 4 years ago
3
can I use prokka to annotate genomes other than the ones included in the default databases?

#473 fedeserral closed 4 years ago
1
use locus_tag from reference genome when annotating with the --proteins option

#472 ramiroricardo closed 4 years ago
4
Custom database - "cleaned product"

#471 jellila closed 4 years ago
2
Question on output inlA genes

#470 scotan opened 4 years ago
1
could one "opt out" of Genbank submission

#469 phiweger opened 4 years ago
1
Database of small proteins

#468 tseemann opened 4 years ago
0
could not run command: tbl2asn ....in prokka

#467 limin321 closed 4 years ago
1
Does prokka autodetect archaea genomes?

#466 Rob-murphys closed 4 years ago
3
'Kp30660NJST2581.fasta' is not a readable non-empty FASTA file in prokka docker

#465 kenken86 closed 4 years ago
9
prokka for MAGs

#464 willnotburn closed 4 years ago
1

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