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tseemann
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prokka
:zap: :aquarius: Rapid prokaryotic genome annotation
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locus tag in prokka output
#560
rthapa1
opened
3 years ago
0
Fails at blast step?
#559
raw937
opened
3 years ago
1
Incorrect annotations from custom database
#558
jellila
opened
3 years ago
1
initialization of Vm error
#557
nanzhen102
opened
3 years ago
1
prokka stalls on tbl2asn step + solved fix
#556
DaLizardWizard
opened
3 years ago
1
could not run command: cat hp27_anotacion\/prokka_03022021\.proteins\.tmp\.1\.faa --proteins (option)
#555
fedeserral
closed
3 years ago
0
ncRNA prediction does not work
#554
Ekie22
opened
3 years ago
2
Patch
#553
zdk123
closed
3 years ago
0
prokka download issue
#552
rthapa1
opened
3 years ago
0
NCBI-GBFF
#551
kullrich
closed
3 years ago
0
Continue interrupted prokka run
#550
gcagle1
opened
3 years ago
1
blastp version issue
#549
Ankita-1211
closed
3 years ago
4
inference using ISFinder fails NCBI submission
#548
mjcoynejr
opened
3 years ago
1
how to update blastp?
#547
zhuanghemu
closed
3 years ago
4
Prokka contigs too long
#546
kevmu
opened
3 years ago
0
Help with for loop
#545
hillms
closed
3 years ago
0
check blast version fails due to v2.10 which is recognized as <2.2
#544
uloeber
opened
3 years ago
8
Update README.md
#543
stepan-mammothbio
opened
3 years ago
0
date format in gbk file
#542
fetyj
closed
3 years ago
9
How higher quallity annotations can we expect?
#541
Rob-murphys
opened
3 years ago
0
Databases not indexed; after indexing they *still* aren't indexed? Or are they missing?
#540
wolfgangrumpf
opened
3 years ago
12
Rfam 14.3 is out
#539
pvstodghill
opened
3 years ago
0
Prodigal: don't set metagenome mode if training file given
#538
jvolkening
opened
3 years ago
0
Make it possible to set a coverage and/or identity threshold that only covers proteins.faa when using --proteins
#537
avonm
opened
3 years ago
0
Could not determine version of signalp ISSUE
#536
stemicha
opened
3 years ago
0
--noanno and --rawproduct options
#535
jfourquet2
opened
3 years ago
0
Prokka error message
#534
FCPLab007
closed
3 years ago
1
prokka gbk output Locus line layout error Biopython. using --proteins
#533
CarmenSheppard
closed
3 years ago
1
blastp version number comparison error
#532
CuriousTim
closed
3 years ago
3
Mitocondrial annotation irregularities
#531
passdan
opened
3 years ago
2
Prokka stops without generating files and without offering an apparent error
#530
LRT-14
opened
3 years ago
5
Sequin Segmentation fault
#529
stan-iakhno
opened
3 years ago
0
Prokka is not generating all the files while invoking prokka using shell script but working fine while running directly from commandline, why?
#528
Unlock-ViV
opened
3 years ago
14
Specify --coverage for proteins in my own FASTA db used with --proteins
#527
avonm
opened
3 years ago
0
lots of in frame stop codons (mitochondrial mode)
#526
JWDebler
closed
3 years ago
1
Format of .faa file for using --proteins
#525
avonm
closed
3 years ago
1
What database are included in lastest version, is prokka suitble for virus?
#524
zhaoxvwahaha
opened
3 years ago
0
ERROR conda.core.link:_execute(502): An error occurred while uninstalling package 'defaults::pip-10.0.1-py27_0'.
#523
dikshyantg
opened
3 years ago
1
Prokka halts at annotation of CDS
#522
beherrm
opened
3 years ago
0
inconsistency in prokka annotation
#521
vappiah
opened
3 years ago
3
Can prokka annotate only from --protein file?
#520
Zazgah
opened
4 years ago
6
Issue after conda install: Can't locate Bio/Root/Version.pm in @INC (you may need to install the Bio::Root::Version module)
#519
c-leber
opened
4 years ago
23
Can I turn off CRISPR prediction?
#518
ilnamkang
closed
4 years ago
2
Use version objects for version cmp
#517
kiwiroy
opened
4 years ago
0
Does the manual stop affect the results that have been generated?
#516
PhoebeCc
opened
4 years ago
0
Circular genome option
#515
vappiah
opened
4 years ago
0
circularized genome
#514
vappiah
opened
4 years ago
0
fix typos in README.md
#513
smsaladi
closed
4 years ago
1
Annontating for both virus and bacteria
#512
nongiga
opened
4 years ago
0
problem with tbl2asn
#511
tivdnbos
closed
4 years ago
2
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