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Hi Arang,
My assembly was constructed with HiFi reads only, and I try to use Merqury to evaluate my assembly, but the error I have encountered:
```shell
/nfs_fs/nfs3/jiezhang/sunwu_genome/softwar…
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Hi Yang,
Thank you for this great tool! We are interested in organizing subcellular localization of tens of thousands of lncRNAs. But it seems that submitting to the web version of the tool doesn't …
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@Deeptivarshney
Ok, looks like there are only a few remaining minor inconsistencies, perhaps this is intentional/expected/ok, in which case please ignore and close this issue again, but otherwise …
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Hi, thank you for developing such an excellent software.
### pVACseq: Discrepancy between {sample_id}.all_epitopes.tsv and {sample_id}.fasta ?
#### Description
I have successfully run pVACse…
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Here is the command I used, which I understand means I am allocating 100 GB of memory to the process:
`AAFTF polish --method polca -i DS1bio.rmdup.fasta -o DS1bio.polca.fasta -c 256 --left DS1bio_fi…
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Hello, I am using the software in my non-model species data.
I want to ask how to obtain two files, training_mRNA.fasta and training_lncRNA.fasta, in this step. Is it a file that directly applies ex…
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Hi,
I'm running minigraph-cactus v2.8.1 for a small region of a genome with the following command:
```
singularity exec --contain --bind $(pwd):/data $SCRIPTS cactus-pangenome \
/data/jobstore $fa…
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Currently, user sequence fasta files are not being imported correctly. We are actively working on a fix.
Error:
(saccharis) abbottlab@proteus:/media/abbottlab/QNAP-Proteus/kristin/test$ sacchari…
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Hi,
I'm trying to create a database before running a cluster analysis, however I'm getting a "Fasta entry 0 is invalid" error.
I have tried creating databases in another fasta files and there's n…