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FredHutch
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VISCtemplates
Tools for writing reproducible reports at VISC
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Prepare to address #135
#175
slager
opened
5 hours ago
0
Warnings when knitting report templates
#174
slager
opened
2 days ago
0
Create project report subdirectory if doesn't already exist
#173
slager
closed
5 days ago
0
Add GitHub Actions runner to mimic statsrv
#172
slager
closed
6 days ago
0
Update SCHARP logo
#171
asatofh
opened
1 week ago
0
Reminder to tweak snapshots upload method
#170
slager
opened
1 week ago
0
CI check for #168
#169
slager
closed
3 days ago
4
Tests for knitting all report types, via enabling non-interactive use of create_visc_project(), use_visc_report(), and use_visc_methods()
#168
slager
closed
1 week ago
11
Placeholder issue for bugfix in visc_load_pdata() user interface
#167
slager
closed
1 week ago
1
Speed up skeleton action via binary R pkg installations
#166
slager
closed
2 weeks ago
1
Long runtime for package skeleton Github action
#165
slager
closed
2 weeks ago
3
VISCfunctions to Imports
#164
slager
closed
2 weeks ago
1
Respect existing repos option
#163
slager
closed
1 week ago
4
insert_break() not working for Word output
#162
kelliemac
opened
3 weeks ago
0
Spring cleaning for template.tex
#161
kelliemac
opened
3 weeks ago
0
Fix latex template issue with etex and \reserveinserts
#160
kelliemac
closed
3 weeks ago
6
Fix for issue with latest RStudio version rendering PDFs
#159
kelliemac
opened
1 month ago
23
Create a participant cohort section template
#158
asatofh
opened
1 month ago
1
skeleton.Rmd file not being created when using use_visc_report()
#157
lemireg
closed
5 days ago
7
Guidance on how to generate figures and tables in a for loop (DRY principle)
#156
kelliemac
opened
1 month ago
1
Specify default colors and shapes for figures
#155
kelliemac
opened
1 month ago
3
Update R package loading
#154
kelliemac
closed
1 week ago
2
add acknowledgments section to report
#153
kelliemac
closed
1 month ago
0
Add friendly error message from visc_load_pdata() when data package not installed
#152
slager
closed
3 weeks ago
0
improve visc_load_pdata() error message when data package is not installed
#151
slager
closed
3 weeks ago
0
Error compiling reports to pdf in recent version of RStudio
#150
kelliemac
opened
1 month ago
2
Git object compare
#149
slager
closed
3 weeks ago
0
Tweaks and tests for adding visc_load_pdata()
#148
slager
closed
2 months ago
4
add visc_load_pdata function to keep in a centralized location
#147
valduran18
closed
2 months ago
3
add visc_load_pdata() function
#146
valduran18
closed
2 months ago
1
Specify approved locations for installing data packages
#145
kelliemac
closed
1 week ago
1
Update BAMA positivity call definition per Alicia's request
#144
kelliemac
closed
1 month ago
1
Update template background section text per request from Alicia
#143
kelliemac
closed
1 month ago
3
Auto-generate non-empty (e.g., BAMA) report skeletons (PDF and docx) using GitHub actions
#142
kelliemac
closed
6 days ago
1
Nicer formatting for report .docx files
#141
kelliemac
opened
3 months ago
2
change master to main
#140
mayerbry
closed
2 months ago
1
Create Version 1.2
#139
mayerbry
closed
2 months ago
0
Testing new github workflows with simple branch
#138
kelliemac
closed
3 months ago
0
Update develop with changes to master
#137
mayerbry
closed
3 months ago
0
add tests 😬
#136
mayerbry
opened
3 months ago
5
Reorganize/rename code files nested under R/
#135
kelliemac
opened
3 months ago
1
Fix double section numbering in word doc template
#134
kelliemac
closed
3 months ago
0
Add GitHub action to automatically render skeleton.Rmd when pull requests are made
#133
kelliemac
closed
3 months ago
7
Fix GitHub Actions R CMD check CI
#132
slager
closed
4 months ago
3
GitHub actions R CMD check CI is outdated and fails to run
#131
slager
closed
4 months ago
1
Include checks for data version, branch, sha and data hash in template script
#129
Sal4321
opened
4 months ago
1
Update background.rmd to add additional detail
#128
asatofh
closed
1 month ago
2
Update BAMA methods: positivity call definition
#127
asatofh
closed
1 month ago
1
Add/create templates for ADCC LUC and GTL methods (PR #109)
#126
asatofh
opened
4 months ago
0
Add acknowledgements section to standard report template
#125
kelliemac
closed
1 month ago
4
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