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gEAR
The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Seq and more.
https://umgear.org
GNU Affero General Public License v3.0
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Two Ensembl IDs for Nrxn2
#698
DanLesperance
opened
10 hours ago
0
Refactor user account creation page for UI-V2
#660
jorvis
closed
1 day ago
1
Import 7 new high-memory datasets for Shreyash (QiuShendure Embryo)
#697
jorvis
opened
6 days ago
1
Assess updated scanpy clustering tutorial
#696
adkinsrs
opened
6 days ago
0
V2: Add link in primary nav menu for tutorials/demos
#695
jorvis
opened
1 week ago
0
Scanpy 1.9.8 upgrade
#694
adkinsrs
closed
1 week ago
2
687 v2 allow dataset to be added to a layout multiple times
#693
adkinsrs
closed
1 week ago
0
Add support for D. melanogaster into gEAR/NeMO portals
#692
jorvis
opened
2 weeks ago
0
snRNAseq Data Uploaded - Still Error on Display
#691
gear-portal-team
opened
2 weeks ago
2
V2 - Allow dataset to be added to a layout multiple times
#687
adkinsrs
opened
4 weeks ago
3
add ability to control dot size in static tSNE/MAP scatters
#618
carlocolantuoni
closed
6 months ago
23
Refactor dataset collection page for ui-v2
#671
adkinsrs
opened
1 month ago
4
Allow user to disable downloads for their dataset
#429
jorvis
opened
1 year ago
3
When projecting a weighted gene cart, if all weights are 1 or 0, then add "binary gene count" projection option
#666
carlocolantuoni
closed
1 month ago
4
V2 - De-duplicate code within the expression and projection pages
#690
adkinsrs
opened
3 weeks ago
0
Use GCP resources to auto-shut down devel VMs if idle or off-business hrs
#677
adkinsrs
opened
1 month ago
3
V2 - Add "history state" for expression and projection pages
#683
adkinsrs
closed
3 weeks ago
5
Create tool to export gene cart SQL
#689
jorvis
closed
3 weeks ago
0
put the human's inner ear cells in order by the level of gene expression
#688
gear-portal-team
opened
4 weeks ago
4
High resolution .png download for static tSNE/MAP scatter plots
#667
carlocolantuoni
closed
3 weeks ago
25
V2 - update URL shortener "p" page
#674
adkinsrs
closed
3 weeks ago
1
UI-V2 - Potential race condition loading plugins
#665
adkinsrs
opened
2 months ago
2
V2 - Expression/Projection View - Fix full-width "expression-only" tSNE displays
#684
adkinsrs
opened
1 month ago
1
Figures for review paper
#685
gear-portal-team
opened
4 weeks ago
4
E-mails not currently sending on production server
#686
jorvis
closed
4 weeks ago
1
Gene expression
#673
gear-portal-team
closed
4 weeks ago
3
Fixing bug where single-gene curator would not plot
#681
adkinsrs
closed
1 month ago
0
Bugfix 678 beta comparison tool fails to show conditions after selecting a dataset
#679
adkinsrs
closed
1 month ago
2
Beta comparison tool fails to show conditions after selecting a dataset
#678
jorvis
closed
1 month ago
0
Resolves #678
#680
adkinsrs
closed
1 month ago
0
Add (even temporary) support to disable downloads of selected datasets
#675
jorvis
closed
1 month ago
1
Update SSL keys on devel
#676
jorvis
closed
1 month ago
0
Test upgrading scanpy/anndata
#670
adkinsrs
opened
1 month ago
2
Refactor plot_display_config.js
#570
adkinsrs
opened
10 months ago
2
Color customization in static tSNE/UMAP scatter plots
#668
carlocolantuoni
closed
1 month ago
6
Issue with clustering
#669
gear-portal-team
opened
2 months ago
4
533 single cell workbench explore filtering out clusters or merging clusters
#568
adkinsrs
closed
10 months ago
0
Update pandas to v2+
#620
adkinsrs
opened
6 months ago
1
Ability to do some common expression normalizations in the dataset curators
#664
JPReceveur
opened
2 months ago
6
ui-v2 Refactor projection search page
#656
adkinsrs
closed
2 months ago
1
Replace nice-select2 gene search dropdowns with simple autocomplete
#639
adkinsrs
closed
2 months ago
1
Dataset/Gene/Pattern selectors - Clear search results if text input field is cleared
#662
adkinsrs
closed
2 months ago
1
Gene Collection Selector - Error when selecting "Recent"
#657
adkinsrs
closed
2 months ago
1
sc Workbench primary analysis error for non-tsne/umap coordinates
#663
JPReceveur
opened
2 months ago
3
Index and expression page - highlight region if no dataset collection selected after searching
#645
adkinsrs
closed
2 months ago
2
Ensure history recording functions on main are also on ui-v2 branch
#659
jorvis
closed
2 months ago
1
Missing dataset in beta
#661
echrysostomou
opened
2 months ago
0
Gene Mapping System Used in Inner Ear Organoid (Steinhart) Dataset
#653
gear-portal-team
closed
2 months ago
4
refactor compare_datasets.js
#616
adkinsrs
closed
2 months ago
5
Update Flask to v3.0.0
#621
adkinsrs
opened
6 months ago
4
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