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KarchinLab
/
open-cravat
A modular annotation tool for genomic variants
MIT License
110
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27
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Clinvar Update: Clinvar ID blank
#284
jwehr618
closed
1 week ago
1
Clinvar module version 2024.08.01 appears to have lost ClinvarID as well as the link to Clinvar online database.
#282
clinical-ngs
closed
2 weeks ago
1
Install modules as part of a conda env
#281
esebesty
opened
3 weeks ago
1
Annotation confusion
#280
cheanney
opened
3 weeks ago
1
Fix module detail modal from job submit page
#279
skanderson
opened
1 month ago
0
🚨📢 Scheduled server outage 7/14 to 7/19
#278
kmoad
closed
1 month ago
1
ACMG Plugin
#277
zuber-bioinfo
opened
1 month ago
1
feat/user email gui
#276
skanderson
opened
1 month ago
0
Support for PhyloP30 and Phastcons30
#275
tkmamidi
opened
1 month ago
1
❗Module Store Server Outage
#274
skanderson
closed
2 months ago
1
Error while runnin OC on window paltform
#273
amarinderthind
closed
1 month ago
1
scipy is not installed as a requiremnt
#272
cvaske
opened
2 months ago
1
Feat/import job UI
#270
kmoad
closed
2 months ago
0
Update genecode mapper
#269
cheanney
opened
2 months ago
1
Update websubmit js module to play nice with multiuser
#268
skanderson
closed
2 months ago
0
Add link to suggest new annotator to store page
#267
skanderson
closed
2 months ago
0
Feat/db download
#265
kmoad
closed
2 months ago
0
Add new help links to GUI
#263
skanderson
closed
2 months ago
0
Revert "Add HGVS example input to job submission page"
#251
kmoad
closed
3 months ago
0
Add HGVS example input to job submission page
#250
skanderson
closed
3 months ago
0
oc module install-base issue
#249
marcellobeltrami
opened
3 months ago
2
Update link in OC versions <v2.5 is unreadable and unusable
#248
RachelKarchin
closed
4 months ago
1
Feat/vcfanno
#235
kmoad
closed
4 months ago
0
Remove imp package
#233
skanderson
closed
4 months ago
2
feat/hgvs converter: Add supporting features for HGVS converter
#232
skanderson
closed
4 months ago
1
How to update Open-CRAVAT from v2.2.9 to v2.5.0 ?
#231
lmanchon
closed
4 months ago
1
IndexError: index out of range when annotating vcf file
#230
MarvinDo
opened
5 months ago
1
View error logs from GUI
#228
kmoad
closed
5 months ago
0
incorrect SO assignment - "exon_loss_variant" for intronic region
#227
EugeneEA
opened
5 months ago
1
Github action for releases
#225
jhiggins
closed
4 months ago
0
Ambiguous annotation results
#223
cheanney
closed
5 months ago
1
Fix error in metrics when file system type cannot be found
#222
skanderson
closed
5 months ago
0
Fix update all modules button functionality
#221
skanderson
closed
4 months ago
0
python 3.12 module imp deprecated
#214
Kaddea
closed
4 months ago
1
Single variant tab not working!
#213
tkmamidi
closed
5 months ago
2
Fix dict KeyError in cravat_convert
#212
skanderson
closed
5 months ago
0
KeyError in sample_id with multiple VCF files
#210
meyerkm
closed
6 months ago
1
Homozygous reference variants
#209
kkmarkel
closed
6 months ago
1
New databases creation
#211
RP-Bioinfo
closed
5 months ago
4
Access to error logs from web server
#208
tkmamidi
opened
6 months ago
1
Support for Spanning or overlapping deletions
#207
tkmamidi
closed
6 months ago
1
first SV parsing code
#206
Jeltje
closed
6 months ago
0
silent failures from multiple annotators
#205
cariaso
closed
6 months ago
2
rdata download option not working
#204
samuelbharti
opened
8 months ago
1
Variant Conversion
#203
jwehr618
closed
2 months ago
3
gnomad update
#202
cheanney
opened
8 months ago
1
pharmgkb OC and website differing annotations
#201
iranmdl
opened
8 months ago
7
Error in IGV widget
#200
RachelKarchin
closed
8 months ago
1
UniProt
#199
jwehr618
closed
5 months ago
2
Litvar
#198
jwehr618
closed
5 months ago
2
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