caporaso-lab mockrobiota issues

caporaso-lab / mockrobiota

A public resource for microbiome bioinformatics benchmarking using artificially constructed (i.e., mock) communities.

http://mockrobiota.caporasolab.us

BSD 3-Clause "New" or "Revised" License

76 stars 35 forks source link

issues

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How can I distinguish those three mock communities from Mock-10 data?

#93 chunyuma closed 3 years ago
2
added relevant COI mock community info and rep seqs

#92 devonorourke opened 5 years ago
2
Is Mock-1 HiSeq or MiSeq?

#91 opalmeira closed 5 years ago
2
Mock 11 primers

#90 dkioroglou closed 6 years ago
1
replace QIIME 1 commands with QIIME 2 commands

#89 gregcaporaso opened 6 years ago
0
nifh mock revise1

#88 roey-angel closed 6 years ago
0
updated inventory

#87 nbokulich closed 6 years ago
0
nifH mock

#86 roey-angel closed 6 years ago
2
Mock2 expected abundance replication issue

#85 dkioroglou closed 6 years ago
4
Added mock-27 (nifH_even) and mock-28 (nifH_tiered)

#84 roey-angel closed 6 years ago
4
add accuracy data and recommendations for mock communities on README

#83 nbokulich opened 6 years ago
0
Trouble generating a pull request

#82 roey-angel closed 6 years ago
3
Update index.md

#81 nbokulich closed 6 years ago
0
readme: absolute link for contributing doc

#80 nbokulich closed 6 years ago
0
CONTRIBUTING.md not found

#79 roey-angel closed 6 years ago
1
Demultiplexing Reverse Reads

#78 nearinj closed 6 years ago
5
Question about barcode length in mock2 and mock6

#77 MathieuCharles opened 6 years ago
1
Error preprocessing mock 7 and 8 : Failed qual conversion

#76 MathieuCharles closed 6 years ago
1
fixing taxa names

#75 nbokulich closed 7 years ago
0
new inventory through mock-26

#74 nbokulich closed 7 years ago
0
fixed readmes in mock-3 4 5

#73 nbokulich closed 7 years ago
0
fixed an errant taxon in mock-1 2 6 7 8 12

#72 nbokulich closed 7 years ago
0
fixed source seqs and taxonomy for mock 9 and 10

#71 nbokulich closed 7 years ago
0
new ITS mocks 24, 25, 26

#70 nbokulich closed 7 years ago
0
minor Readme fixes for mock-18 and mock-19

#69 nbokulich closed 7 years ago
0
Adding expected seqs for mock-9, 10, 18, 19

#68 nbokulich closed 7 years ago
0
adding/amending expected-sequences for mock-3-5, 13-15, 20-23

#67 nbokulich closed 7 years ago
0
add expected greengenes and silva taxonomy for mock-18 and mock-19

#66 nbokulich closed 7 years ago
0
Tweak readmes

#65 nbokulich closed 7 years ago
0
fixing staggered composition in mock-21 and mock-23

#64 nbokulich closed 7 years ago
0
Update inventory

#63 nbokulich closed 7 years ago
0
fixed mock-3 readme

#62 nbokulich closed 7 years ago
0
Failing to demultiplex mock-3

#61 benjjneb closed 7 years ago
3
Added more explicit taxonomy information about expected sequences

#60 BenKaehler closed 7 years ago
2
Potential issue demultiplexing mock-8

#59 wasade closed 7 years ago
2
Add mock-17 metagenome dataset and minor revisions to README.md docs

#58 nbokulich closed 7 years ago
0
split_libraries_fastq.py error with golay barcodes (mock-5 & -7)

#57 fwhelan closed 7 years ago
8
update CONTRIBUTING.md to describe new dir path requirements

#56 nbokulich closed 7 years ago
2
Fix inventory

#55 nbokulich closed 7 years ago
0
new data integrity checks

#54 gregcaporaso opened 7 years ago
5
Shotgun Mock

#53 davidvilanova closed 7 years ago
2
adding auto-annotate and inventory compilation scripts, plus new annotation files

#52 nbokulich closed 7 years ago
3
Update readme.md files to update barcode information

#51 nbokulich closed 7 years ago
1
Unable to replicate community composition of Mock-3

#50 adityabandla closed 7 years ago
3
Issue 47

#49 nbokulich closed 7 years ago
0
Update readmes

#48 nbokulich closed 7 years ago
0
Update required metadata

#47 nbokulich closed 7 years ago
0
Automatic taxonomy string extraction

#46 nbokulich opened 7 years ago
0
Update inventory

#45 nbokulich closed 7 years ago
1
update raw data hyperlinks

#44 gregcaporaso closed 7 years ago
0