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compSPI
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ioSPI
I/O and Data Visualization
MIT License
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Tests on installation of jupyter on GitHub runner stalling
#90
bongjinkoo
closed
2 years ago
3
Refactor datasets.py and update corresponding unit tests/tutorial notebook
#89
bongjinkoo
closed
2 years ago
3
Add Colab links to notebooks
#88
ninamiolane
opened
2 years ago
0
During pre-commit, black fails
#87
bongjinkoo
closed
2 years ago
4
PR tests issue
#86
artajmir3
opened
2 years ago
0
Fake
#85
artajmir3
opened
2 years ago
2
push fake.fred for test
#84
fredericpoitevin
closed
2 years ago
1
Added initial code for density maps
#83
artajmir3
opened
2 years ago
2
Added initial simple code for density maps
#82
artajmir3
closed
2 years ago
1
Remove __init__.py from the project root
#81
bongjinkoo
closed
2 years ago
2
Document detergent belt building in a notebook
#80
fredericpoitevin
opened
2 years ago
0
Library installation issue
#79
fKunstner
closed
2 years ago
0
Add Slides from hackathon presentation at PIMS
#78
ninamiolane
opened
2 years ago
4
Implement io tools to manipulate cryo-EM density maps
#77
ninamiolane
opened
2 years ago
1
Add Checklist that comes up for each new PR created
#76
ninamiolane
closed
2 years ago
1
Edit environment.yml + Add unit-tests for particle_metadata.ipynb
#75
ninamiolane
closed
2 years ago
7
Refactor datasets.py module
#74
ninamiolane
opened
2 years ago
1
Organize ioSPI's notebooks
#73
ninamiolane
opened
2 years ago
3
Write a notebook on the use of the micrographs.py module
#72
ninamiolane
opened
2 years ago
0
Write a notebook on the use of the atomic_models.py module
#71
ninamiolane
opened
2 years ago
0
Add programmatic way to download and upload data to OSF - link to an existing project with 80s data
#70
ninamiolane
closed
2 years ago
5
Fix instructions: first git clone then create conda env
#69
ninamiolane
closed
2 years ago
0
Remove unncessary test file.
#68
fredericpoitevin
closed
2 years ago
2
I/O for 3D map files on disk (mrc, hd5, etc) to arrays (numpy.ndarray, torch.tensor, etc)
#67
geoffwoollard
closed
2 years ago
1
remove vae_parameters.json
#66
geoffwoollard
closed
2 years ago
0
Functions to retrieve gemmi atoms from gemmi model
#65
fredericpoitevin
closed
2 years ago
1
Luis master
#64
fredericpoitevin
closed
2 years ago
4
Documentation for fix for failed testing during PRs from forks
#63
geoffwoollard
closed
2 years ago
1
Documentation on forking to avoid ioSPI tests failing during PRs.
#62
geoffwoollard
closed
2 years ago
0
test PR pass - no authentication errors
#61
geoffwoollard
closed
2 years ago
1
PR from feature branch of developer's fork to feature branch of main compSPI fork
#60
geoffwoollard
closed
2 years ago
2
test if user geofwoollard can make a feature branch on the main (compSPI) fork of ioSPI and merge into main
#59
geoffwoollard
closed
2 years ago
0
debugging io tests
#58
arjunsingh3600
closed
2 years ago
0
Debugging tests from clone repo (after adding secret)
#57
arjunsingh3600
closed
2 years ago
0
Debugging tests from clone repo
#56
arjunsingh3600
closed
2 years ago
0
Debugging test failure
#55
arjunsingh3600
closed
2 years ago
3
Check to see if tests passing
#54
geoffwoollard
closed
2 years ago
1
Write pseudo-atoms to PDB/mmCIF
#53
fredericpoitevin
closed
2 years ago
3
First version of the ioSPI notebook tutorial
#52
luis-sribeiro
closed
2 years ago
6
remove fourier - after Checkout via command line
#51
geoffwoollard
closed
2 years ago
4
Remove files that had re-appeared post-cleaning
#50
ninamiolane
closed
2 years ago
1
Remove fourier from ioSPI
#49
geoffwoollard
closed
2 years ago
3
programmatic way to download datasets from OSF
#48
jedyeo
closed
2 years ago
12
Error in write_crd_file
#47
ninamiolane
closed
2 years ago
3
Refactoring
#46
thisFreya
closed
2 years ago
3
Remove FFT code.
#45
fredericpoitevin
closed
2 years ago
4
Reverse init
#44
ninamiolane
closed
2 years ago
1
Add modules in __init__
#43
ninamiolane
closed
2 years ago
1
First clean of repository's structure
#42
ninamiolane
closed
2 years ago
2
Dataset/tags
#41
arjunsingh3600
closed
2 years ago
1
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