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thegenemyers
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DALIGNER
Find all significant local alignments between reads
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ONE2LA.c: fix build failure with gcc 14.
#97
emollier
opened
2 weeks ago
0
ONElib.c: fix missing include.
#96
emollier
opened
4 months ago
0
fix typos caught by Debian linter "lintian"
#95
emollier
opened
6 months ago
0
LAsort Issue when called from daligner
#94
BradleyRan
opened
4 years ago
2
LAsort: segfault in old code
#93
a-ludi
closed
4 years ago
6
LAsort: segfault with automatic de-dup'ing
#92
a-ludi
opened
4 years ago
2
Add optional fix to LAcheck
#91
a-ludi
closed
4 years ago
0
Race condition (probabily) due to temp files
#90
a-ludi
closed
4 years ago
5
Output trace point spacing (`-s`) in `LAdump`
#89
a-ludi
closed
4 years ago
2
2Gbp limit on DB blocks?
#88
pbnjay
closed
5 years ago
5
Fix typo writing to stdout
#87
pb-cdunn
opened
5 years ago
2
LAsort and LAmerge error: cannot open
#86
daniellezhang
closed
4 years ago
4
daligner error
#85
smm19900210
closed
4 years ago
1
Fix invalid memory access
#84
a-ludi
closed
5 years ago
1
New version tag(s) since v1.0
#83
peterjc
closed
4 years ago
0
Fix LAcheck block-arg
#82
pb-cdunn
closed
6 years ago
1
running HPC.daligner script
#81
peritob
closed
6 years ago
2
Writing in /tmp
#80
pb-cdunn
closed
6 years ago
3
Thread setup for lex_sort
#79
JEzpeleta
closed
6 years ago
1
Unmanageable output size (and runtime) for daligner on a large dataset
#78
jwhitney31337
closed
6 years ago
1
Minor compilation warning
#77
pb-cdunn
closed
6 years ago
1
damapper maps a sequencing run, but daligner reports no significant mappings
#76
leucinedreams
closed
6 years ago
6
DB2Falcon and LA4Falcon
#75
mictadlo
closed
6 years ago
4
reducing memory usage
#74
mictadlo
closed
6 years ago
2
daligner: Track 'dust' annotation file is junk
#73
mictadlo
closed
6 years ago
2
Error in HPC.daligner (I think): No such file or directory
#72
pb-cdunn
closed
6 years ago
1
LAshow: Segmentation fault
#71
pb-cdunn
closed
6 years ago
1
DASqv error after merging and then splitting las files
#70
zkstewart
closed
6 years ago
8
Mutual containment
#69
gt1
closed
6 years ago
1
Fix diagnostic for missing mask
#68
pb-cdunn
closed
6 years ago
1
Fwrite/Fclose
#67
pb-cdunn
closed
6 years ago
1
genome with 30%GC content
#66
hermeseduardo
closed
6 years ago
2
Add meson build system
#65
SoapZA
closed
6 years ago
2
fixed: missing .las extension when removing lv1 .las files
#64
spock
closed
6 years ago
1
LAsplit produces empty la's?
#63
spock
closed
6 years ago
4
Still Getting Duplicated Regions Error
#62
BioWu
closed
6 years ago
1
align SMRT cells against a reference
#61
mictadlo
closed
6 years ago
1
Removing repeats before assembly
#60
mictadlo
closed
7 years ago
2
HPC.daligner -d option cleanup
#59
gt1
closed
7 years ago
1
LAcheck LAS-file error: "Trace point sum != aligned interval"
#58
DDDolle
closed
6 years ago
6
LAmerge example
#57
mictadlo
closed
7 years ago
2
Add option for read length output to 'LAshow' and 'LAdump'
#56
DDDolle
closed
7 years ago
1
Still getting Duplicate overlap
#55
hodgett
closed
6 years ago
17
Honor standard compiler/linker flags
#54
0xaf1f
opened
7 years ago
0
Identify (-I) flag in HPC.daligner
#53
gt1
closed
7 years ago
1
Fix memcpy to overlapping memory
#52
pb-cdunn
closed
7 years ago
2
LAdump: not all trace-points
#51
pb-cdunn
closed
7 years ago
1
LAcheck: Too many alignment records
#50
pb-cdunn
closed
7 years ago
10
Segfaul in tuple_thread
#49
gt1
closed
7 years ago
1
"confirmed" vs. "seed" hits
#48
pb-cdunn
closed
7 years ago
1
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