ucsc-cgp cgp-deployment issues

ucsc-cgp / cgp-deployment

The UCSC Genomics Institute's Computational Genomics Platform (CGP). This repo contains the Docker compose-based deployment process.

https://ucsc-cgp.org

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Create new release of commons.ucsc-cgp-dev.org

#85 cricketsloan closed 5 years ago
0
Updated Docker image release versions for new cgp-deployment release

#84 mjkrause closed 5 years ago
0
Remove nginx dev option for common containers (resolves #82)

#83 mjkrause closed 5 years ago
0
Remove `dev` installation option from `cgp-deployment`, `feature/common`

#82 cricketsloan closed 5 years ago
0
Install Bootstrap doesn't initialize the dos-dss-service variable in the .env file

#81 cricketsloan opened 5 years ago
0
Update azul image to commons-0.1.11-beta

#80 jessebrennan closed 5 years ago
0
Automated Testing Improvements for CGP

#79 cricketsloan closed 5 years ago
1
Update `integration test` (fixes #77)

#78 mjkrause closed 5 years ago
0
`integration.sh` to test deployment of feature/commons still looking for `redwood` storage

#77 cricketsloan closed 5 years ago
0
Fix release versions in `prod.yml` (no assoc. issue)

#76 mjkrause closed 5 years ago
2
Remove code that supports the bagit-FC-lambda-based export to FC

#75 cricketsloan closed 5 years ago
1
Corrected paragraph explaining role of Google Client and Secret (fixes #73)

#74 mjkrause closed 5 years ago
1
Clarify significance of logging into Boardwalk in README

#73 mjkrause closed 5 years ago
0
Update README once persistent-S3-BDBags are implemented (resolves #55)

#72 mjkrause closed 5 years ago
0
Changed environment variables relating to BDBag-to-S3 (resolves #61)

#71 mjkrause closed 5 years ago
1
Update docker images for azul and dashboard

#70 jessebrennan closed 5 years ago
0
Spaces in install_bootstrap values can throw errors

#69 cricketsloan opened 5 years ago
0
When containers are brought down we should probably ---remove-orphans

#68 cricketsloan opened 5 years ago
1
Update images for production

#67 jessebrennan closed 5 years ago
0
Add aws region to azul

#66 jessebrennan closed 5 years ago
0
Remove endpoint variable being passed to Boardwalk (fixes #64)

#65 coverbeck closed 5 years ago
1
Remove endpoint variable being passed to Boardwalk

#64 cricketsloan closed 5 years ago
0
Do not set BW_DATA_URL for Boardwalk in docker compose files

#63 cricketsloan closed 5 years ago
0
Add environment variables for BDBag-to-S3 to dcc-dashboard-service (resolves #61)

#62 mjkrause closed 5 years ago
4
Add AZUL_S3_AWS_REGION and AZUL_PRESIGNED_URL_EXPIRATION to dcc-dashboard-service

#61 cricketsloan closed 5 years ago
1
Remove postgres variables from dashboard install

#60 cricketsloan closed 5 years ago
1
Add AWS vars to dashboard and fix encryption key

#59 jessebrennan closed 5 years ago
1
Change AWS variable names in mustache template for Boardwalk (fixes #49)

#58 mjkrause closed 5 years ago
0
Change AWS variable names in mustache template for Boardwalk

#57 cricketsloan closed 5 years ago
0
Update installer (resolves DEP-21)

#56 jessebrennan closed 5 years ago
2
Update README in cgp-deployment once persistent-S3-BDBags are implemented

#55 cricketsloan closed 5 years ago
0
Adding env. vars. AWS_ACCESS_KEY and AWS_SECRET_ACCESS_KEY to installation files (#49).

#54 mjkrause closed 5 years ago
0
change `install_bootstrap.sh` to accommodate for S3-persistent BDBag functionality

#53 cricketsloan closed 5 years ago
1
Add AZUL_S3_BUCKET environment variable to `install_bootstrap.sh` and make changes to mustache template.

#52 mjkrause closed 5 years ago
1
Corrected path to build dcc-dashboard-service service for dev-mode.

#51 mjkrause closed 5 years ago
0
Correct build path for dcc-dashboard-service in `dev-mode`

#50 cricketsloan closed 5 years ago
0
set up AWS credentials for S3-persistant BDBag as part of cgp-deployment

#49 cricketsloan closed 5 years ago
2
Update Installer to prompt for Authn/z information

#48 cricketsloan closed 5 years ago
0
Update README to contain description to set up an S3 bucket for BDBag.

#47 mjkrause closed 5 years ago
1
two changes to enable Boardwalk to run in dev mode

#46 mjkrause closed 5 years ago
0
Feature/update readme

#45 mjkrause closed 5 years ago
0
Feature/deploy dev

#44 mjkrause closed 5 years ago
0
Feature/update readme

#43 mjkrause closed 5 years ago
1
Sequence Diagrams for CGP Deployment

#42 cricketsloan opened 5 years ago
2
Update dev deployment to use new DOS Azul URL

#41 cricketsloan closed 5 years ago
0
Updated prod.yml to build using the commons-0.1.3-beta dcc-dashboard

#40 coverbeck closed 5 years ago
0
edited release version to 0.1.5

#39 mjkrause closed 6 years ago
0
Certificate Expired on charles.ucsc-cgp-dev.org

#38 cricketsloan closed 5 years ago
1
Cgp-Deployment Doesn't work with Azul in dev mode

#37 cricketsloan opened 6 years ago
0
Updated prod.yml to use commons-0.1.4-beta azul/webservice

#36 GPelayo closed 6 years ago
0