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CellProfiler
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CellProfiler-plugins
Community-contributed and experimental CellProfiler modules.
http://plugins.cellprofiler.org/
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TypeError in RunCellpose in GPU mode
#154
braymp
opened
2 years ago
5
Added written instructions for runCellpose and runStardist
#153
rsenft1
closed
2 years ago
0
fix gpu test
#152
bdiazroh
closed
2 years ago
0
omnipose fix
#151
bdiazroh
closed
2 years ago
0
Update settings
#150
bdiazroh
closed
2 years ago
0
Add Omnipose as part of the RunCellpose plugin
#149
bdiazroh
closed
2 years ago
0
RunImageJScript: improve param behavior
#148
hinerm
closed
1 year ago
2
Cellpose new version incompatible with runcellpose
#147
jesusdpa1
closed
2 years ago
0
plugin added to module folder but doesn't see it in cellprofiler modules
#146
MariamFa
closed
1 year ago
1
Cannot find my plugin in Other module category
#145
Tiany1Pan
closed
2 years ago
1
CP-IJ: Multiprocessing refactor
#144
hinerm
closed
2 years ago
3
Speed up and clean up callbarcodes
#143
bethac07
closed
2 years ago
5
Share GPU memory across workers
#142
bethac07
closed
2 years ago
0
Gpu memory flush global
#141
rsenft1
closed
2 years ago
0
Add Directory setting for File parameters
#140
hinerm
closed
2 years ago
2
EnhancedMeasureTexture patch fixing #133 #134
#139
imoutsatsos
closed
2 years ago
3
RunImageJScript: a File input argument in FIji script should convert to both CP directory / filename settings
#138
alicelucas
closed
2 years ago
0
added delete model to runCellPose
#137
rsenft1
closed
2 years ago
3
convert to 8 bit if we're sure it's 8 bit
#136
bethac07
closed
2 years ago
1
RunCellPose not clearing GPU memory
#135
rsenft1
closed
2 years ago
20
EnhancedMeasureTexture Module loading fails with missing 'from_matlab' positional argument error
#134
imoutsatsos
closed
1 year ago
1
EnhancedMeasureTexture throws error while processing
#133
imoutsatsos
closed
1 year ago
0
Update to installation instructions on runstardist.py
#132
bdiazroh
closed
2 years ago
0
Allow cellprob_threshold to take on values between -6 and 6 in RunCellPose
#131
alicelucas
closed
2 years ago
0
Add Noise2Void Module
#130
nestabentum
opened
2 years ago
1
Add flow_threshold and cellprob_threshold params as cp settings
#129
alicelucas
closed
2 years ago
5
Add more parameters to RunCellpose plugin
#128
abhamacher
closed
2 years ago
0
Update RunIJScript
#127
hinerm
closed
2 years ago
3
Update requirements.txt to include cellpose
#126
hinerm
closed
1 year ago
4
Add RunStarDist plugin
#125
DavidStirling
closed
2 years ago
0
Add RunCellpose plugin
#124
DavidStirling
closed
3 years ago
1
CP4 plugins (GUI)
#123
fczerni
closed
1 year ago
1
Adding trained model
#122
jccaicedo
closed
1 year ago
1
classifypixelsunet error: Model has moved from Google Drive
#121
r0f1
closed
1 year ago
2
Create RunImgeJScript Module
#120
hinerm
closed
3 years ago
4
Move declumpobjects plugin to top level directory (works in CP4)
#119
pearlryder
closed
3 years ago
0
Malformed image name (is reported as 'missing') when pipeline runs 'Transforms' plugin module
#118
imoutsatsos
closed
2 years ago
2
CP4 updates, fix csv header read issue
#117
ErinWeisbart
closed
3 years ago
0
Add various speckle enhancers to CompensateColors
#116
bethac07
closed
3 years ago
0
Register with Zenodo and generate releases
#115
votti
closed
1 year ago
1
Contributing `ImcPluginsCP` to this repository
#114
votti
closed
1 year ago
1
patch for #111 fixing Haar Wavelet transform error
#113
imoutsatsos
closed
3 years ago
1
patch for #111 fixing Haar Wavelet transform error
#112
imoutsatsos
closed
3 years ago
1
Transform processing error using 'Haar Wavelet transform' choice
#111
imoutsatsos
closed
3 years ago
4
Fix CP4 plugin loading
#110
DavidStirling
closed
3 years ago
0
CP3 -> CP4: Wiki: Upgrade_setting method dropped 'from_matlab' from it's signature
#109
votti
closed
3 years ago
1
CP3->CP4: Change in use of `add_module_for_tst`
#108
votti
opened
3 years ago
0
Add prototype CP4 plugin versions
#107
DavidStirling
closed
3 years ago
3
v4.0
#106
bethac07
closed
3 years ago
0
ignore empty barcodes
#105
ErinWeisbart
closed
4 years ago
1
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