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Nesvilab
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PD-Nodes
The implementation of MSFragger and Philosopher (PeptideProphet) as Proteome Discoverer nodes
http://www.nesvilab.org/PD-Nodes/
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pd 3.0 node installation not work
#39
asogg
opened
1 month ago
2
PD Nodes in Zip Archives
#38
mdjones
closed
2 months ago
2
The MSFragger Score column is not in the 'Proteins' tab
#37
sciordia
opened
2 months ago
3
Is it possible to use MSFragger in PD 3.1 with the current release?
#36
sciordia
opened
6 months ago
3
Precursor Mass Mode in PD node
#35
wangrui85
closed
7 months ago
2
Memory error raising "System.IO.FileNotFoundException"
#34
FriedLabJHU
closed
10 months ago
10
MSFragger Error Using PD Node
#33
jadowell
closed
7 months ago
13
PD2.5 Phosphopeptide
#32
hyoungjoolee
closed
1 year ago
4
Error when using PD Node: .pepXML file not found
#31
Sinobelus
closed
1 year ago
7
MSFragger for PD3
#30
jayieh
closed
7 months ago
4
Error with PD2.5 node?
#29
Alemarcohen
closed
1 year ago
3
PD-node_same error message
#28
adamurminsky
closed
1 year ago
6
MSfragger node freezing with large number of samples
#27
lyons89
closed
1 year ago
10
setup PD2.5 nodes
#26
yanwang16
closed
2 years ago
8
Custom/Additional Modifications in PD Node MSFragger
#25
mamccabe
closed
2 years ago
1
Unable to run MSFragger in PD2.5
#24
wmnolte
closed
2 years ago
1
PeptideProphet (Philosopher) not running with non-specific searches...
#23
JulBM
closed
2 years ago
10
Bug in PD v2.5 with MsFragger v3.3
#22
sciordia
closed
2 years ago
3
PD 2.4 Node installation error
#20
im281
closed
2 years ago
12
Error on peptide validator
#19
hkweon
closed
2 years ago
9
Request - N-terminal enzymatic digestion
#18
TomClarkMassSpec
closed
3 years ago
1
New functionalities
#17
JurajLenco
closed
3 years ago
2
PD 2.5 Version
#16
romanzenka
closed
3 years ago
1
How to assign more than 7 dynamic modifications in MS Fragger PD 2.4
#15
algom
closed
3 years ago
6
Issues with multiple MSFragger modules in Proteome Discoverer 2.4 searches
#14
SimionKreimer
closed
3 years ago
4
No_Enzyme_Search_Failure using High Performance Desktop with Proteome Discover version 2.3
#13
BenSamy2020
closed
3 years ago
4
source code for the node
#12
animesh
closed
3 years ago
1
Open_Search_Failure using High Performance Desktop with Proteome Discover version 2.3
#11
BenSamy2020
closed
3 years ago
10
Same key error
#10
mikl93
closed
3 years ago
1
ptmshepherd
#9
animesh
closed
3 years ago
1
node doesn't appear [suggested workaround]
#8
animesh
closed
3 years ago
4
Unable to install nodes on PD 2.4 SP1, Windows 10
#7
algom
closed
3 years ago
3
MSFragger in PD2.3, error "the given key was not present in the dictionary"
#6
cheng01
closed
4 years ago
9
No modifications identified using open search with MS Fragger/Philosopher in PD 2.2
#5
kallepult
closed
4 years ago
5
SequestHT search in PD 2.3 with Philosopher failed
#4
somakray
closed
4 years ago
4
PD 2.4 version
#3
roberthardt
closed
4 years ago
1
issue with MS fragger in PD
#2
SudiptoNCI
closed
4 years ago
7
Issue with open searches in PD2.2
#1
jeroendemmers
closed
4 years ago
20