amc-heme scExploreR issues

amc-heme / scExploreR

Shiny app for single cell omics data visualization

https://amc-heme.github.io/scExploreR/

MIT License

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issues

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Features do not auto-populate in Subset Options for DE/Marker Selection

#292 jairav opened 1 week ago
0
241 config app crashes when pressing load config file when no config path is defined

#291 jairav opened 1 week ago
0
Inconsistent behavior on "Save Config File" when config_path=NULL

#290 jairav opened 1 week ago
0
Convert UI to bslib

#289 wish1832 opened 1 week ago
0
Sort plots by feature expression

#288 wish1832 opened 1 week ago
1
Units on expression plot axes aren't clear

#287 wish1832 opened 2 weeks ago
0
Sort metadata by factor levels (if present) in all menus

#286 wish1832 opened 3 weeks ago
0
categorical subset values ordered alphanumerically or levels called i…

#285 srg0502 closed 3 weeks ago
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Update README.md

#284 jairav closed 3 weeks ago
0
disabled correlation tab #258

#283 srg0502 closed 3 weeks ago
0
Choose plot size in inches and resolution instead of pixels

#282 wish1832 opened 4 weeks ago
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Subset interface with categorical metadata: do not autofill variable

#281 wish1832 opened 1 month ago
0
Error when making blended feature plot

#280 wish1832 opened 1 month ago
1
Add ADT thresholds chosen upon browser set-up

#279 wish1832 opened 1 month ago
0
Cell type proportion plot initializes in an error state

#278 wish1832 opened 1 month ago
0
Documentation for Object Guidelines

#277 wish1832 opened 1 month ago
1
Review documentation prior to release

#276 wish1832 opened 1 month ago
1
Improved control of color palettes

#275 wish1832 opened 1 month ago
0
Document feature differences between object formats

#274 wish1832 opened 1 month ago
1
Document or improve interface for filtering DGE table results

#273 wish1832 opened 1 month ago
3
Tab for subset information

#272 wish1832 opened 1 month ago
0
Cell type proportion data in tabular format

#271 wish1832 opened 1 month ago
0
Sort proportion plots by increasing/decreasing values by a group

#270 wish1832 opened 1 month ago
0
Add labels to proportion plot

#269 wish1832 opened 1 month ago
0
Save/Load subset filters

#268 wish1832 opened 1 month ago
0
Sort metadata values alphanumerically in subset interface preview

#267 wish1832 closed 1 month ago
1
Infinite loop in plots tab

#266 wish1832 opened 1 month ago
3
Disable accept subset button while filters are being edited

#265 wish1832 closed 4 weeks ago
2
Add number of cells, percentage of cells information for subset threshold interface

#264 wish1832 opened 1 month ago
0
Object dictionary: metadata description cards have blank headers when metadata labels are not defined in the config app

#263 wish1832 opened 1 month ago
1
Pull updates from main into rudimentary_auth branch

#262 agillen closed 1 month ago
0
Improve Structure of Auto-Generated Object Dictionary

#261 wish1832 closed 1 month ago
0
Fix #253, Pandoc bug

#260 wish1832 closed 1 month ago
0
The DGE is spitting out a feature number instead of gene name

#259 anavujovic1 closed 1 month ago
1
Gene correlation issue

#258 sheltoia closed 3 weeks ago
3
Issue with updating DEG list in scExploreR-AML

#257 anavujovic1 closed 1 month ago
2
scExploreR errors when trying to install Bioconductor dependencies

#256 jairav closed 3 weeks ago
1
Inspect numeric threshold based DGE for data with NA values

#255 wish1832 opened 3 months ago
1
Remove metadata groups interface from app?

#254 wish1832 opened 3 months ago
0
Config app freezes when categorical metadata with many values are passed

#253 wish1832 closed 1 month ago
0
Changes to description, config app, documentation

#252 wish1832 closed 4 months ago
0
Update Dataset Setup Vignette

#251 wish1832 closed 4 months ago
0
Reconcile pkgdown, R Markdown rendering

#250 wish1832 closed 4 months ago
0
Render Dataset Setup Vignette "as-is"

#249 wish1832 closed 4 months ago
0
Add bslib installation to pkgdown workflow

#248 wish1832 closed 4 months ago
0
Modfiy pkgdown workflow

#247 wish1832 closed 4 months ago
0
Pre-compute Dataset Setup Article

#246 wish1832 closed 4 months ago
0
Merge Dev Version Into Main

#245 wish1832 closed 4 months ago
0
Add methods for DGE

#244 wish1832 closed 4 months ago
0
Update run_scExploreR.R

#243 jairav closed 5 months ago
0