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galaxyproteomics
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tools-galaxyp
Galaxy Tool Shed repositories maintained and developed by the GalaxyP community
MIT License
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Adding Lysine-D4 (deuterated lysine) as aa-modification in Proteomic tools
#715
qcsciphi
closed
9 months ago
0
Updated output label in ThermoRawFileParser
#714
zargham-ahmad
opened
1 year ago
1
OpenMS MSFragger has excessively long description
#713
mthang
opened
1 year ago
4
Calisp initial commit
#712
bernt-matthias
closed
1 year ago
2
Add combat batch correction for imzml files
#711
MarenStillger
closed
1 year ago
2
Add QuPath ROI splitter
#710
npinter
closed
1 year ago
7
Reporting a vulnerability
#709
igibek
opened
1 year ago
0
DecoyDatabase bug
#708
neoformit
closed
1 year ago
5
Failed to generate the output for 07 test-data
#707
mthang
opened
1 year ago
2
thermo raw file converter changes names of files in the collection
#706
hechth
closed
8 months ago
12
Should maxquant tools fail when PXTQC fails?
#705
eschen42
opened
1 year ago
1
updating Maldiquant tools
#704
foellmelanie
closed
1 year ago
0
Tool request: calisp
#703
bernt-matthias
closed
8 months ago
1
merged redundant parameters
#702
eschen42
closed
1 year ago
1
corrected sorting issue and non-useful parameter setting
#701
eschen42
closed
1 year ago
1
update macros.xml and maxquant.xml
#700
mthang
closed
1 year ago
8
cosmetic improvements to presentation
#699
eschen42
closed
1 year ago
3
Add new reference for MaxQuant, MSStats and MSStatsTMT
#698
npinter
closed
1 year ago
1
OpenMS 3.1
#697
bernt-matthias
closed
2 weeks ago
3
Running Maxquant on pulsar node
#696
mthang
opened
1 year ago
4
mqppep enhancement; bump to v0.1.16
#695
eschen42
closed
1 year ago
1
bump for OpenMS2.8 deployment
#694
bernt-matthias
closed
1 year ago
0
fix owner for deploy job
#693
bernt-matthias
closed
1 year ago
0
sync CI workflows with IUC
#692
bernt-matthias
closed
1 year ago
0
Peptideshaker: problem with large zip files
#691
gallardoalba
opened
1 year ago
0
Maxquant: Add modifications
#690
gallardoalba
closed
1 year ago
0
fixed case of mzxml and mzml in maxquant_mqpar tool
#689
eschen42
closed
1 year ago
3
MS Covert Error on DIA file
#688
TTCooper-PhD
opened
1 year ago
0
Update uniprotxml_downloader to use new Uniprot API
#687
reid-wagner
closed
1 year ago
0
Update msconvert README.md
#686
cat-bro
closed
1 year ago
1
Pepquery2
#685
jj-umn
closed
1 year ago
2
added invocation options; improved report; fixed defects; etc
#684
eschen42
closed
1 year ago
2
dbbuilder Fix the uniprokb query syntax
#683
jj-umn
closed
1 year ago
1
Pr 680
#682
jj-umn
closed
1 year ago
11
Latest version of bioconductor-cardinal 2.14.0
#681
mthang
opened
1 year ago
1
fix the uniprot URL
#680
bgruening
closed
1 year ago
1
regex find/replace: use format_source for output
#679
jancrichter
closed
1 year ago
1
Update proteomiqon_psmstatistics to version 0.0.8
#678
ZimmerA
closed
1 year ago
5
Update requirements in proteogenomics macros
#677
chambm
opened
1 year ago
0
eggnog mapper: implement search and annotation phase as additional separate tools
#676
bernt-matthias
closed
10 months ago
6
Xml lower
#675
eschen42
closed
1 year ago
2
update to v0.1.14
#674
eschen42
closed
1 year ago
1
EggNOG: Implement possibility of two stage mode
#673
bernt-matthias
closed
1 year ago
2
Update unipept
#672
jj-umn
closed
2 years ago
0
Maxquant running on Pulsar node.
#671
mthang
closed
1 year ago
0
bump eggnog
#670
bernt-matthias
closed
2 years ago
1
Please include new protein modifications in xml file
#669
arman-kulyyassov
closed
1 year ago
1
Update pep_pointer to use python3
#668
cat-bro
closed
2 years ago
0
fix https://github.com/galaxyproteomics/tools-galaxyp/issues/666
#667
bgruening
closed
2 years ago
1
Change the defalt gene prediction method to Prodigal for genoem and metagenome
#666
igormakunin
closed
2 years ago
1
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