sivarajankumar fluxcapacitor issues

sivarajankumar / fluxcapacitor

Automatically exported from code.google.com/p/fluxcapacitor

0 stars 0 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

field value 5 missing

#73 GoogleCodeExporter opened 8 years ago
0
Simulator: Null Pointer Exception in Fragmenter

#72 GoogleCodeExporter opened 8 years ago
0
No documentation for READ_DESCRIPTOR parameter

#71 GoogleCodeExporter opened 8 years ago
0
Error message - Parameter FASTQ not found

#70 GoogleCodeExporter closed 8 years ago
2
Problems during sequencing

#69 GoogleCodeExporter opened 8 years ago
1
TMP_DIR parameter ignored

#68 GoogleCodeExporter closed 8 years ago
4
Graphical User Interface for Flux Simulator 1.0

#67 GoogleCodeExporter opened 8 years ago
2
Sorter does not use custom temporary directory

#66 GoogleCodeExporter closed 8 years ago
2
"ANNOTATION_MAPPING Combined" does not accept valid READ_DESCRIPTOR parameter

#65 GoogleCodeExporter closed 8 years ago
2
Problem with GTF sorter

#64 GoogleCodeExporter closed 8 years ago
3
Limit RAM-memory usage

#63 GoogleCodeExporter closed 8 years ago
0
error when producing FASTA / FASTQ

#62 GoogleCodeExporter closed 8 years ago
5
Changing TMP_DIR

#61 GoogleCodeExporter closed 8 years ago
1
filtering options

#60 GoogleCodeExporter closed 8 years ago
3
Error appending data to profile on windows

#59 GoogleCodeExporter closed 8 years ago
2
Separate Library construction not working.

#58 GoogleCodeExporter closed 8 years ago
12
Sorting GTF file… doesn't sort it

#57 GoogleCodeExporter closed 8 years ago
3
Sorting GTF file causes NullPointerException

#56 GoogleCodeExporter closed 8 years ago
5
Disable TSS_MEAN

#55 GoogleCodeExporter closed 8 years ago
1
FluxSimulator Documentation

#54 GoogleCodeExporter closed 8 years ago
1
Include mutations of the genomic reference in the simulation (SNPs, DIPs, etc.)

#53 GoogleCodeExporter opened 8 years ago
1
Hangs or crashes on ``initing''

#52 GoogleCodeExporter closed 8 years ago
6
Estimate disk space usage

#51 GoogleCodeExporter opened 8 years ago
0
no FASTQ file created

#50 GoogleCodeExporter closed 8 years ago
2
No fasta file produced

#49 GoogleCodeExporter closed 8 years ago
8
No quality output (FASTQ file)

#48 GoogleCodeExporter closed 8 years ago
9
correlation of transcript length, number of molecules and sequenced reads

#47 GoogleCodeExporter closed 8 years ago
2
How to set up a specific expression value for each transcript

#46 GoogleCodeExporter closed 8 years ago
1
Empty results in most cases

#45 GoogleCodeExporter closed 8 years ago
3
safepoint.cpp error

#44 GoogleCodeExporter closed 8 years ago
10
Sequencing fails, gtf files with 2-3 genes

#43 GoogleCodeExporter closed 8 years ago
6
Sequencing fails

#42 GoogleCodeExporter closed 8 years ago
2
Can't copy GTF file

#41 GoogleCodeExporter closed 8 years ago
3
size selection problem

#40 GoogleCodeExporter closed 8 years ago
1
how to generate the pair-end reads in two separate files?

#39 GoogleCodeExporter closed 8 years ago
1
cannot generate more than 4 million short reads

#38 GoogleCodeExporter closed 8 years ago
12
Why is the number of cDNA library less than the number of molecules?

#37 GoogleCodeExporter closed 8 years ago
1
The fastq file contains empty short reads

#36 GoogleCodeExporter closed 8 years ago
2
Can Flux simulator generate biological or technological replicates?

#35 GoogleCodeExporter closed 8 years ago
1
Simulator temporary folder

#34 GoogleCodeExporter closed 8 years ago
7
ArrayIndexOutOfBoundsException with PositionErrorProfile at the last position of the read

#33 GoogleCodeExporter closed 8 years ago
4
NullPointerException in reverse transcription with poly-dT

#32 GoogleCodeExporter closed 8 years ago
3
Sequencing module ignores error profile

#31 GoogleCodeExporter closed 8 years ago
4
Trouble installing on Linux

#30 GoogleCodeExporter closed 8 years ago
1
Simulator cannot handle identical transcript IDs

#29 GoogleCodeExporter closed 8 years ago
2
polyA tails inmediary to transcript sequence

#28 GoogleCodeExporter closed 8 years ago
2
sorted files erro

#27 GoogleCodeExporter closed 8 years ago
2
Tutorial

#26 GoogleCodeExporter closed 8 years ago
2
"Create New Run" Window error

#25 GoogleCodeExporter closed 8 years ago
2
simulator fasta compiler error

#24 GoogleCodeExporter closed 8 years ago
5