blahah transrate issues

blahah / transrate

Understand your transcriptome assembly

http://hibberdlab.com/transrate

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issues

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Transrate conda

#254 pmomadeira closed 1 month ago
1
Linux binary for v1.0.3 cannot be downloaded

#253 fran-romero-campero opened 7 months ago
2
Update snap.rb to fix failure to build index

#252 IdoBar opened 8 months ago
0
Transrate FASTQ based run not working

#251 Gruxxis opened 11 months ago
1
Compiled repo link is obsolete

#250 asan-emirsaleh opened 1 year ago
0
salmon version to be installed by --install-deps=all

#249 asan-emirsaleh opened 1 year ago
0
Snap index error

#248 asan-emirsaleh opened 1 year ago
3
salmon: error while loading shared libraries

#247 Liyong-Zhang opened 1 year ago
1
merge assemblies

#246 ewelinarubin opened 2 years ago
1
Linux download not working v1.0.3

#245 Tina-L-Nguyen opened 2 years ago
1
Conda installation fails based on 'glibc' dependency issue

#244 timslittle closed 3 years ago
1
supported bridges.csv missing from output

#243 Shabbirm21 opened 3 years ago
0
Broken link to obtain code

#242 chrisreidy opened 3 years ago
1
weird results (v1.0.3)

#241 manuelsmendoza opened 4 years ago
5
Failed to install-deps

#240 Gyzele opened 4 years ago
21
Discrepancy in ORF count between contigs.csv and assemblies.csv

#239 zagorGit closed 4 years ago
2
transrate with 2left and 2 right fastq files?

#238 VaneSGT closed 4 years ago
3
[ERROR] 2020-04-22 12:10:41 : ReadMetrics: could not find bam-read in path

#237 VaneSGT closed 4 years ago
0
Depend on salmon 0.7.2

#236 gbrsales opened 4 years ago
0
SNAP error in Transrate with large dataset

#235 upendra2020 opened 4 years ago
1
Not able to install transrate (ruby error) ?

#234 sunnyEV opened 4 years ago
0
Installation error: Error installing transrate-1.0.3.gem ERROR: Failed to build gem native extension

#233 lychen83 opened 4 years ago
0
SNAP error

#232 zolotarovgl opened 5 years ago
1
MPI implementation

#231 rafaeltiveron opened 5 years ago
1
Transrate broken and unsupported?

#230 Shellfishgene closed 5 years ago
4
tpm, eff_count, and coverage all zero in contigs.csv

#229 matthewabirk opened 5 years ago
1
Snap found unmatched read IDs in input fastq files

#228 elainfl opened 5 years ago
2
The solvation of librt.so.1 in Ubuntu 16.04 server

#227 life404 opened 5 years ago
2
transrate in conda project

#226 manuelsmendoza closed 5 years ago
4
Snap failing due to memory requirements on large transcriptomes

#225 kvpmulder opened 5 years ago
2
Salmon is failing

#224 sagnikbanerjee15 opened 6 years ago
4
Salmon

#223 weedcentipede opened 6 years ago
1
Using current version of Salmon

#222 algebio opened 6 years ago
0
CPU instruction shared across concurrent transrate runs

#221 Jeremias-Brand opened 6 years ago
0
Unexpectedly low `p fragments mapped`

#220 kmnip opened 6 years ago
0
Dependencies are missing -salmon (0.6.0)

#219 Portvin opened 6 years ago
1
SNAP failing in v 1.0.3

#218 ssander5 opened 6 years ago
5
Weird read mapping metrics on version 1.0.3

#217 RuiMMFaria opened 6 years ago
0
`terminal_columns': undefined method `winsize' for nil:NilClass

#216 antonkulaga opened 7 years ago
5
bioconda install for transrate?

#215 apredeus opened 7 years ago
6
Gem install failing on Ubuntu 17.04

#214 nickschurch opened 7 years ago
0
error sched_setaffinity: Invalid argument with transrate v1.0.3

#213 KhudyakovLab opened 7 years ago
0
A few changes to Transrate

#212 macmanes closed 7 years ago
0
How to perform metrics based on reads using single fastq file

#211 patrick-douglas closed 7 years ago
1
Salmon (0.6.0) [jointLog] [warning] [Sampler.hpp]: Failed to sample an alignment

#210 XinpengQi opened 7 years ago
4
SNAP Fail to run with 1.0.3

#209 jdeyar opened 7 years ago
0
Weird read mapping metrics on version 1.0.3

#208 RuiMMFaria opened 7 years ago
10
makeblastdb issues

#207 genizamt opened 7 years ago
4
SNAP failed with Transrate v 1.0.3

#206 Jinjie-Duan opened 7 years ago
8
After installing transrate via ruby showing syntex errror

#205 hackerzone85 closed 8 years ago
1