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dviraran
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SingleR
SingleR: Single-cell RNA-seq cell types Recognition (legacy version)
GNU General Public License v3.0
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Assigning cell types problem
#163
esoaress
closed
2 months ago
1
Error while downloading SingleR
#162
isaiao01
opened
3 months ago
1
Error: useNames = NA is defunct. Instead, specify either useNames = TRUE or useNames = FALSE. Traceback:
#161
ArzooShamoon
opened
3 months ago
1
SingleR - "sc_data" is missing
#160
nitinmahajan20
opened
4 months ago
1
Positive correlation between the identity score of the right identities and the rest
#159
cesarsierran
opened
5 months ago
0
SingleR error
#158
Jessa135
opened
6 months ago
1
Annotate Seurat object of several patients
#157
LeaLe88
opened
9 months ago
0
Can we use SingleR to annotate BulkRNAseq when reference is also bulk
#156
Rohit-Satyam
closed
9 months ago
3
Microwell-Seq Mouse Cell Atlas link on README.md is not working
#155
vladimirkovacevic
opened
11 months ago
0
Questions about confidence score
#154
Kevis9
opened
1 year ago
0
discriminant features
#153
antoine4ucsd
opened
1 year ago
0
issue with input?
#152
eliabrodsky1
opened
2 years ago
0
SingleR Performance Issue
#151
rohitgarg2411
closed
2 years ago
0
SingleR() error
#150
Fathzadehm
opened
2 years ago
2
Error in rowAnyNAs(DelayedArray(x))
#149
Lijunyao8
closed
2 years ago
1
create custom reference dataset
#148
andynkili
closed
1 year ago
2
Error in is.null(rownames(x)) && nrow(x) : invalid 'y' type in 'x && y'
#147
njtourtillott
opened
3 years ago
4
Can't download MouseRNAseqData
#146
JiahuaQu
opened
3 years ago
0
the Seurat3.2.2 load and SingleR 1.0.1 conflict error
#145
honghh2018
opened
3 years ago
1
'assay(<SingleCellExperiment>, i="character", ...)' invalid subscript 'i' 'dimnames' applied to non-array
#144
aanchalsharma833
opened
3 years ago
0
can i annotate cells in specific cell types?
#143
hansonglee
opened
3 years ago
0
How to annotation cluster by singleR 1.2.4
#142
zenghh1226
closed
3 years ago
2
Retrieving a list of marker genes which were used assign cell type labels to clusters
#141
jdd1e16
opened
3 years ago
1
Cell labeling using SingleR in seurat
#140
ruchikabhat
opened
3 years ago
1
Minor fixes on lines 33 & paragraph 35
#139
kant
opened
4 years ago
0
Seurat object as input and normalization
#138
Diozao666
opened
4 years ago
1
plotDeltaDistribution not found
#137
ghost
opened
4 years ago
1
how to create a new reference data set
#136
Shawn10312
opened
4 years ago
4
Adding annotations
#135
AteeqMKhaliq
opened
4 years ago
2
can't find any of the functions related to reference data sets
#134
nawazahid
opened
4 years ago
1
Download failed
#133
chansigit
closed
4 years ago
1
Timeout error
#132
KBoostan
opened
4 years ago
2
error in BlueprintEncodeData()
#131
rachelzhu123
opened
4 years ago
1
Function"CreateSinglerSeuratObject" was not found! Where's the way out?
#130
chuanyang-learner
opened
4 years ago
1
Updated Bioconductor link
#129
dtm2451
closed
4 years ago
0
SingleR install issue
#128
hi9739
opened
4 years ago
2
About how to construct the trainning data set for building the annotation database of other species
#127
BioAIEvolu
opened
4 years ago
1
undefined columns selected
#126
rahulnutron
opened
4 years ago
1
SingleR installation error: ‘SingleR’ is not available (for R version 3.6.1)
#125
shintzen
closed
4 years ago
1
SingleR web tool
#124
phoebee-h
opened
4 years ago
2
Bug in Dataset function HumanPrimaryCellAtlasData()
#123
saisaitian
opened
4 years ago
1
Error in use the function SingleR.Subset when reproduce the Figures in paper
#122
duosu
closed
4 years ago
0
bug in CreateBigSingleRObject
#121
systemsgenomics
opened
4 years ago
1
Applying of Seurat cell-clustering analysis in SingleR
#120
erikfel97
opened
4 years ago
3
The SingleR.PlotTsne error
#119
nanshanjin
closed
4 years ago
0
can not download sqlite3 file
#118
BioLaoXu
closed
4 years ago
1
fineTuningRound method
#117
xiebb123456
opened
4 years ago
1
Bioconda version of SingleR
#116
hramadas
opened
4 years ago
1
Create SingleR object from an existing seurat object
#115
naamama
opened
4 years ago
7
'rownames(test)' does not contain all genes used in 'trained'
#114
Yoon-Seob-Kim
opened
4 years ago
1
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