dviraran SingleR issues

dviraran / SingleR

SingleR: Single-cell RNA-seq cell types Recognition (legacy version)

GNU General Public License v3.0

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issues

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'rownames(test)' does not contain all genes used in 'trained'

#114 Yoon-Seob-Kim opened 5 years ago
1
Error in nn.d^2 : non-numeric argument to binary operator

#113 MMriran opened 5 years ago
6
Error in if (xor(((x[n] - mean(x)) < (mean(x) - x[1])), opposite)) { : argument is of length zero

#112 royfrancis opened 5 years ago
0
Functions in SingleR from bioconductor

#111 hfberg opened 5 years ago
4
CreateSinglerObject Error

#110 KBoostan opened 5 years ago
1
CreateSinglerObject logical subscript too long

#109 jingchen-0927 opened 5 years ago
1
Confliciting single.label and main.label

#108 danshu opened 5 years ago
2
Cannot annotate cells

#107 AmelZulji closed 4 years ago
1
Installation of SingleR version 0.2.1. And number of cells using Seurat vs SingleR package

#106 KeshavB02 opened 5 years ago
2
Cell type abbreviation of mouse.rnaseq

#105 lambdamoses closed 5 years ago
4
CreateBigSingleRObject error

#104 dioncst closed 5 years ago
2
Issue using SingleR within another R package

#103 bbimber closed 3 years ago
1
Matrix dimension matching error

#102 ajwilk closed 5 years ago
1
converting integrated Seurat objects by convertSingleR2Browser

#101 akhst7 opened 5 years ago
5
CreatSinglerobject error

#100 wwn7268 opened 5 years ago
2
Using Seurat Clusters to Annotate Cells based on Clusters

#99 MediciPrime closed 5 years ago
4
xCell for integrated two scRNAseq data.

#98 akhst7 opened 5 years ago
1
CreateSinglerObject error

#97 Zifeng-L opened 5 years ago
1
Installation Failed

#96 nbliangying closed 5 years ago
0
Error in merging datasets: Error in irlba

#95 atermanini opened 5 years ago
1
CreateSinglerSeuratObject error from raw reads

#94 jrnick7 opened 5 years ago
1
Input from Seurat Object

#93 andrewjkwok opened 5 years ago
2
install error

#92 nbliangying closed 5 years ago
4
What's the difference between singler$singler[[1]] and [[2]]

#91 jrnick7 opened 5 years ago
1
cluster in SingleR.DrawHeatmap can go with mutliple classification

#90 huwenhuo opened 5 years ago
0
Merge Seurat objects error

#89 kyriakosschwarz opened 5 years ago
1
SingleR Object not appearing in global environment

#88 daccachejoe closed 5 years ago
0
UMAP instead of tSNE

#87 akhst7 closed 5 years ago
2
Issue with loading a singleR object to a scRNA xcell website

#86 akhst7 closed 5 years ago
2
singleR object data structure

#85 Zepeng-Mu opened 5 years ago
1
cells.use in SingleR.DrawHeatmap

#84 my0916 opened 5 years ago
1
Performing DE like in SingleR Browser in command line

#83 ChaDuss opened 5 years ago
2
Does singleR re-do PCA and clustering?

#82 Zepeng-Mu opened 5 years ago
5
Error when running SingleR.combine

#81 anyone1985 opened 5 years ago
0
is there a annotation for all cell types?

#80 LuyiTian opened 5 years ago
1
point size adjustment in web tool

#79 Zepeng-Mu opened 5 years ago
2
CreateSinglerObject error simpleScore

#78 ChaDuss opened 5 years ago
2
iteration limit reached

#77 Zepeng-Mu closed 5 years ago
4
Error when naming annot data

#76 Zepeng-Mu closed 5 years ago
1
Cell Type abbreviation

#75 dioncst closed 5 years ago
1
CreateBigSingleRObject Error

#74 ishanparanjpe opened 5 years ago
3
Installation Failed

#73 diyang1354 opened 5 years ago
5
Getting Started

#72 WhataShane opened 5 years ago
4
SingleR.DrawHeatmap Error message

#71 shokohirosue opened 5 years ago
3
Disconnected from the server. Unable to load file even the RDS file looks fine.

#70 phoebee-h opened 5 years ago
9
Fix the issue with cor function

#69 chlee-tabin closed 5 years ago
1
names attribute must be same length as vector

#68 mbassalbioinformatics opened 5 years ago
2
CreateSinglerObject: Annotation File 'names' attribute does not match colnames(counts)

#67 reyesj opened 5 years ago
1
SingleR with Seurat 2.3.4

#66 julierodor opened 5 years ago
1
Error message in CreateSinglerObject

#65 ChaDuss opened 5 years ago
3

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