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When you are installing BUSCO version 3.0.2 with conda, it will automatically create a symbol link `run_busco` to `run_BUSCO.py` in `{busco_env_dir}/bin`.
To make it work in conda env, just use `run…
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From some systems during DIBSI 2018:
```
TaskFailed - taskid:busco:trinity.nema.fasta-metazoa_odb9
busco:trinity.nema.fasta-metazoa_odb9 :
Traceback (most recent call last):
File "/home/dibtig…
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Hi,
first of all, thanks for providing such a detailed description of the pipeline used to estimate viral domestication. I have sequenced the genome of a sawfly (Diprion pini) and thought I check if …
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### Description of the bug
Hi,
We have been running nf-core/mag, 2 different versions (2.5.1 and 3.0.1) and we end up with missing files in the GTDB-Tk output directory. The summary.tsv files are in…
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Hello,
I am using hifiasm to perform hifi-only assembly of a allopolyploid species.
While the basic metrics are good (high N50, Complete BUSCO>98%), I got only 57% of Duplicated BUSCO.
I suspect…
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Si alguien está en la misma situación no tengo problemas en formar grupo! ;)
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BUSCO is a standard gene-content analysis program, and is quite informative. The dependencies + integration might be kind of a bummer, but there is a provided VM (https://busco.ezlab.org) which perha…
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**Question or Expected behavior**
Hi, I have recently assembled a genome while BUSCO gives me a 79.2% completeness. I am confused about the result.
Parameters:
[General]
job_type = local
job_pre…
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Hi,
I want to extract a GFF file for subsequent analysis. I have used GTF files from Zoonomia before, but I found that the BUSCO score of the PEP extracted from this GTF file was only 76%. I have dis…
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Hi,
How can I add [Busco's Viridiplantae Odb10](https://busco.ezlab.org/frames/plants.htm) to funannotate?
Thank you in advance
Michal