Teichlab cellphonedb issues

Teichlab / cellphonedb

MIT License

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issues

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Unexpected error after [Clustering Statistical Analysis]

#384 damigua1 opened 2 years ago
0
difficulty in generating custom database with protein complex

#383 guardiangel000 opened 2 years ago
0
Input error cellphonedb statistical analysis

#382 MathiniVaikunthan closed 2 years ago
2
Error when using plot function

#381 FionaMoon opened 2 years ago
5
pvalue is 1 or 0

#380 xiasijian opened 2 years ago
1
error in analysis using self database

#379 xanthexu opened 2 years ago
0
cell number and molecular interaction

#378 wangjiawen2013 opened 2 years ago
0
Can not got a file of "pvalues.txt"

#377 xiaoxiaofuyou opened 2 years ago
0
How to order the heatmap plot?

#376 GangZoo1 opened 2 years ago
0
Running real time pathway analysis error

#375 airfan0 opened 2 years ago
0
mismatch

#374 airfan0 closed 2 years ago
0
error : ValueError: Columns must be same length as key

#373 jinyuanchun closed 2 years ago
6
Dot plot problem: Error in all_pval[match(selected_rows, intr_pairs), selected_columns]

#372 Zaein opened 2 years ago
3
Error processing Meta data

#371 Zaein closed 2 years ago
1
read count.h5ad error

#370 yen-tran-91 opened 2 years ago
2
dot_plot cant show labels

#369 lgmp315 closed 2 years ago
1
threshold for setting means in mean.txt and significant_means.txt

#368 sadiexiaoyu opened 2 years ago
0
Should we sub-sample cells for cellphoneDB?

#367 xxl619755841 opened 2 years ago
0
Backwards Interactions

#366 mfrisoli126 opened 2 years ago
1
Gene format missmatch.

#365 dfc-1931475 opened 2 years ago
1
After downloading and installing, an error is reported. How to update the version and download the database

#364 chentongouc opened 2 years ago
0
cellphonedb plot issue

#363 ParkMiSo opened 2 years ago
3
dot_plot return empty figure

#362 xiangyupan opened 2 years ago
1
Need help: Recurrent error "TypeError: ufunc 'add' did not contain a loop with signature matching types dtype('<U21') dtype('<U21') dtype('<U21')"

#361 hjbp0610 closed 2 years ago
1
No CellPhoneDB interacions found in this input.

#360 monikaramos closed 2 years ago
2
why the p values and mean values of clusterA-clusterB are different with the clusterB-clusterA?

#359 zyan0626 closed 2 years ago
1
Update README.md

#358 prete closed 2 years ago
1
Heatmap normalization?

#357 bhavyaac opened 3 years ago
0
do you have an example on how to interpret the dot plot and heatmap from real study example? something like notebook

#356 FADHLyemen opened 3 years ago
0
whether to set --subsampling-log as true or false

#355 990331 closed 3 years ago
0
Direct comparison between groups

#354 qingwang1 opened 3 years ago
1
No CellPhoneDB interacions found in this input

#353 poorvi4 closed 3 years ago
6
The ligand and receptor on dotplot issue

#352 honghh2018 closed 2 years ago
1
Unable to call cellphonedb functions after install

#351 aokhan closed 3 years ago
6
P-values high across clusters? [conceptual question]

#350 bhavyaac opened 3 years ago
0
P-value Format

#349 julie-jch closed 2 years ago
7
read meta and count file error

#348 gevin-MB closed 2 years ago
1
Invalid Count Data

#347 mfrisoli126 closed 3 years ago
8
identify contaminant population?

#346 bobermayer closed 3 years ago
1
How are the mean values calculated in the Means.txt output file from CellphoneDB

#345 julie-jch closed 3 years ago
2
Invalid Counts data

#344 nobie666 opened 3 years ago
1
p-value correction/adjusting

#343 yanwengong opened 3 years ago
2
Understanding how to use the database files and extract a simple ligand/receptor table

#342 nathanin closed 2 years ago
2
Cannot read count.txt

#341 zhouyutong123 closed 2 years ago
3
count_network

#340 cadyyuheng closed 3 years ago
2
Pvalue Threshold Error

#339 Pedramto89 opened 3 years ago
3
Installation instructions result in CellphoneDB v1 being installed

#338 GBeattie closed 3 years ago
4
Partner A and Partner B delimiter query

#337 GBeattie closed 3 years ago
2
Do not get an output from statistical analysis

#336 Pedramto89 closed 3 years ago
2
Error "Plan shapes are not aligned"

#335 TehseusKunka opened 3 years ago
3