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[cell-level metadata] detect and label duplicated barcodes
#60
gerbeldo
closed
5 months ago
1
[cell-level metadata] remove previously existing cell-level metadata cellsets
#59
gerbeldo
closed
8 months ago
0
[Bug] Frequency plot is showing incorrect 'count' data
#58
vickymorrison
closed
5 months ago
0
[Bug] Data sharing modal not displaying info
#57
vickymorrison
closed
5 months ago
1
Batch differential expression better loading alert
#56
StefanBabukov
closed
5 months ago
0
[Bug] plots and tables heatmap bugs
#55
StefanBabukov
closed
5 months ago
0
[Bug] Creating many projects from the data repository at the same time
#54
StefanBabukov
closed
5 months ago
0
Disable the commits from biomage-org/api in biomage-org/iac
#53
Kristian-A
closed
5 months ago
1
[Bug] Download expression matrix fails sometimes
#52
vickymorrison
closed
5 months ago
0
[Bug] Frequency plot x-axis title is hard coded to 'sample' when it should change according to selection
#51
vickymorrison
closed
7 months ago
1
H5AD- Allow for h5ad upload (UI)
#50
Kristian-A
opened
9 months ago
0
H5AD- Allow for h5ad upload (API)
#49
Kristian-A
opened
9 months ago
1
H5AD- Add H5AD file type in sql
#48
Kristian-A
opened
9 months ago
0
[Bug] Downloading SVG plot from Categorical Embedding shows labels even when they are hidden
#47
vickymorrison
closed
7 months ago
0
Select best package for H5AD processing.
#46
ogibson
closed
5 months ago
0
[H5AD upload] Test Alevin/Fry output. Test CellXGene database files.
#45
ogibson
closed
5 months ago
0
[Cell-level metadata] Make Process Project button show up for cell level metadata
#44
cosa65
closed
5 months ago
1
[Cell-level metadata] Update the Add metadata select
#43
cosa65
closed
5 months ago
1
Seurat Pipeline automated cluster detection renames values in a confusing way
#42
gerbeldo
opened
10 months ago
1
Support gene symbols for rds files downloaded from Cellenics and uploaded using the Seurat object pipeline
#41
gerbeldo
opened
10 months ago
1
Experiments with default reduction different than "umap" or "tsne" fail Seurat Pipeline
#40
gerbeldo
closed
5 months ago
9
Fix usability of Data Management module for accounts with many experiments
#39
gerbeldo
closed
5 months ago
0
[Cell-level metadata] Send new metadataS3Path parameter to qc runs
#38
cosa65
closed
7 months ago
0
Fix the 'Share' button
#37
vickymorrison
closed
5 months ago
1
[Cell-level metadata] Implement in the Pipeline
#36
gerbeldo
closed
8 months ago
0
[H5AD Upload] Plan H5AD upload epic
#35
gerbeldo
closed
5 months ago
3
Should we change the retention policy for ECR?
#34
kafkasl
closed
5 months ago
0
[Cell-level metadata] Update Normalized Expression Table to handle new types of cell sets
#33
cosa65
closed
7 months ago
0
[Cell-level metadata] Update differential expressions in the UI to handle new types of cell sets
#32
cosa65
closed
5 months ago
2
[Cell-level metadata] Set up s3/sql
#31
cosa65
closed
5 months ago
2
Remove clustering code from the pipeline. Trigger Clustering in the worker, as we do UMAP
#30
gerbeldo
opened
10 months ago
0
Add confirmation to resolution changes in Configure Embedding
#29
gerbeldo
opened
10 months ago
0
[Bug] renaming clusters in data exploration weird behaviour
#28
StefanBabukov
closed
5 months ago
0
Fix release notes after the merge
#27
kafkasl
closed
5 months ago
0
[Development speed improvement] check why the PRs descriptions are being deleted on HMS
#26
kafkasl
closed
5 months ago
0
[DESIGN DOC] - Remove ETag calculation in the UI
#25
Kristian-A
opened
10 months ago
0
[Performance improvements] Broken embeddings / marker heatmap pre-loading
#24
kafkasl
opened
10 months ago
1
Optimise "full list" (first option) in batch differential expression function
#23
vickymorrison
opened
10 months ago
0
[Performance improvements] Enrich displayed worker info
#22
kafkasl
closed
5 months ago
0
[BUG] worker GA not using cache
#21
alexvpickering
closed
10 months ago
0
[Bug] Retry on fail for subsetting doesn't work
#20
Kristian-A
closed
5 months ago
0
[BUG] Fix plot cleanup trigger
#19
Kristian-A
closed
5 months ago
0
[Development speed improvement] Decouple upload image to ecr from running the tests
#18
cosa65
closed
5 months ago
0
[Performance improvements] Explore how to speed up the worker
#17
kafkasl
closed
5 months ago
0
[Performance improvements] Pre-load marker genes on Data exploration
#16
kafkasl
closed
5 months ago
0
Remove duplicated code related to ScType and download rds worker tasks
#15
cosa65
closed
7 months ago
2
Run migration for ScType fails in copied experiments
#14
cosa65
opened
11 months ago
1
[Bug] Heatmap - selected genes get reset when changing group by settings
#13
cosa65
closed
5 months ago
1
[Design doc] Plan cell-level metadata upload (tsv)
#12
gerbeldo
closed
5 months ago
0
Remove ETag calculation in the UI
#11
StefanBabukov
opened
11 months ago
1
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