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AlexsLemonade
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OpenPBTA-analysis
The analysis repository for the Open Pediatric Brain Tumor Atlas Project
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Add supp table 4 for survival results
#1360
jharenza
closed
2 years ago
3
Add new table S4 - survival results included in manuscript
#1359
jharenza
closed
2 years ago
1
Compiled figure4
#1358
sjspielman
closed
2 years ago
2
re-create 5D forest plot
#1357
jharenza
closed
2 years ago
5
Removed unknown/unavailable resections from relevant survival models
#1356
sjspielman
closed
2 years ago
0
Copy heatmap panels
#1355
sjspielman
closed
2 years ago
1
add panel 4G - tp53/telomerase FP
#1354
jharenza
closed
2 years ago
1
Removed deprecated result file
#1353
sjspielman
closed
2 years ago
1
KM HGG panel
#1352
sjspielman
closed
2 years ago
5
Remove duplicated CI step
#1351
sjspielman
closed
2 years ago
1
Remove extra Table S3
#1350
sjspielman
closed
2 years ago
0
Remove deprecated survival analysis result files
#1349
sjspielman
closed
2 years ago
0
Add survival analysis README
#1348
jharenza
closed
2 years ago
6
medullo cd274 expression/assess immune hot (figure 5E, S5J)
#1347
jharenza
closed
2 years ago
4
Add forest plot for panel 4G
#1346
jharenza
closed
2 years ago
3
update MB immune cell FP - 5d
#1345
jharenza
closed
2 years ago
2
immune cell survival update to include extent tumor resect + lgg group
#1344
jharenza
closed
2 years ago
1
update tp53/telomerase forest plot(s)
#1343
jharenza
closed
2 years ago
3
add extent tumor resection/lgg to tp53/telomerase survival analysis
#1342
jharenza
closed
2 years ago
1
add two tabs to Table S1
#1341
jharenza
closed
2 years ago
3
Compiled Figure 3
#1340
sjspielman
closed
2 years ago
0
Forest plot for panel 5D
#1339
sjspielman
closed
2 years ago
1
Update GSVA analysis and figure
#1338
sjspielman
closed
2 years ago
2
Update GSVA analysis
#1337
sjspielman
closed
2 years ago
0
Create Panel 5D - forest plot
#1336
jharenza
closed
2 years ago
0
Panel 4H - KM curve
#1335
jharenza
closed
2 years ago
4
add NGSCheckMate to S4
#1334
jharenza
closed
2 years ago
1
Update compiled figure S5
#1333
sjspielman
closed
2 years ago
1
Survival analysis of HGG tumor subtypes
#1332
jharenza
closed
2 years ago
7
Update compiled figures S2 and S4
#1331
sjspielman
closed
2 years ago
0
Compiled figure 5
#1330
sjspielman
closed
2 years ago
5
Compiled Figure 2
#1329
sjspielman
closed
2 years ago
1
Updated compiled S3
#1328
sjspielman
closed
2 years ago
0
Updated analysis: add NGSCheckmate to Table S4
#1327
jharenza
closed
2 years ago
4
add Table 2
#1326
jharenza
closed
2 years ago
9
Survival panel for figure4f
#1325
sjspielman
closed
2 years ago
8
Update compiled supplementary figures
#1324
sjspielman
closed
2 years ago
1
Updated analysis: Create HR figures for HGGs
#1323
jharenza
closed
2 years ago
2
Copy panels from Figures 5/S5 to panel folders
#1322
jharenza
closed
2 years ago
1
Update compiled figure 5 and S5
#1321
jharenza
closed
2 years ago
2
Add cancer group plot to immune deconv notebook
#1320
jharenza
closed
2 years ago
2
Updated analysis: Update table S1
#1319
jharenza
closed
2 years ago
2
Create table 2
#1318
jharenza
closed
2 years ago
2
Update compiled Figure S3
#1317
sjspielman
closed
2 years ago
0
Update oncoprint figures
#1316
sjspielman
closed
2 years ago
3
Update Figure 2 oncoprint panels
#1315
sjspielman
closed
2 years ago
4
Deprecate primary-plus oncoprint plots in `figures/` ?
#1314
sjspielman
closed
2 years ago
2
Add compiled figure S5
#1313
sjspielman
closed
2 years ago
2
Add Figure S4 panels and compiled versions
#1312
sjspielman
closed
2 years ago
1
Update Figures 4B/C with only stranded data
#1311
sjspielman
closed
2 years ago
1
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