fractal-analytics-platform fractal-tasks-core issues

fractal-analytics-platform / fractal-tasks-core

Main tasks for the Fractal analytics platform

https://fractal-analytics-platform.github.io/fractal-tasks-core/

BSD 3-Clause "New" or "Revised" License

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issues

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ROI upsampling issue when original image resolution is not divisible by 2

#771 jluethi opened 5 months ago
0
Verify compatibility with Python 3.12

#770 tcompa opened 5 months ago
2
[auto] Update dependencies in `poetry.lock`

#769 tcompa closed 5 months ago
1
Relax Pydantic V1 constraint from `==1.10.16` to `>=1.10.16`

#768 tcompa closed 5 months ago
3
[auto] Update dependencies in `poetry.lock`

#767 tcompa closed 5 months ago
1
Doc updates

#766 tcompa opened 5 months ago
0
Relax pydantic requirements || Switch to transitional pydantic.v1

#765 lorenzocerrone closed 5 months ago
15
Cellpose task: Output ROI table creation performance scaling

#764 jluethi closed 5 months ago
2
Add manifest-building GHA

#763 tcompa closed 5 months ago
2
[cellpose segmentation task] `label` or `wavelength_id` for ChannelInputModel

#762 BioinfoTongLI opened 5 months ago
1
[auto] Update dependencies in `poetry.lock`

#761 tcompa closed 5 months ago
2
Relaxing pydantic requirements

#760 lorenzocerrone closed 5 months ago
6
Improve other-packages task-list page in docs

#759 tcompa closed 5 months ago
2
Possible path towards improvements of tasks JSON schemas

#758 tcompa opened 5 months ago
1
Test JSON-Schema generation on multiple packages

#757 tcompa closed 5 months ago
2
Allow conditional fields & either/or logic

#756 jluethi opened 5 months ago
2
Allow developers to influence schema building in finer detail

#755 jluethi opened 5 months ago
1
Add Fractal Helper tasks to list of tasks

#754 jluethi closed 5 months ago
0
Use new Zenodo datasets in tests

#753 jluethi closed 3 months ago
2
Add APX package to the task list on doc page

#752 jluethi closed 5 months ago
3
Improve docs

#751 tcompa closed 5 months ago
1
Bump tornado from 6.4 to 6.4.1

#750 dependabot[bot] closed 5 months ago
0
Support `Enum` arguments and improve testing of schema-generating tools

#749 tcompa closed 5 months ago
1
Make acquisition metadata optional for Plate pydantic model

#748 jluethi closed 5 months ago
0
[auto] Update dependencies in `poetry.lock`

#746 tcompa closed 6 months ago
1
Support `Enum` task arguments

#745 tcompa closed 5 months ago
6
[auto] Update dependencies in `poetry.lock`

#744 tcompa closed 6 months ago
1
[auto] Update dependencies in `poetry.lock`

#743 tcompa closed 6 months ago
1
Make Cellpose task work for OME-Zarrs without pyramids

#742 BioinfoTongLI opened 6 months ago
4
Addition of chi2_shift as a Method to calculate Shifts to the "Calculate Registration (image-based)" Task

#741 adrtsc closed 5 months ago
11
[auto] Update dependencies in `poetry.lock`

#740 tcompa closed 6 months ago
1
[auto] Update dependencies in `poetry.lock`

#739 tcompa closed 6 months ago
1
Cellpose normalization

#738 fstur closed 5 months ago
11
[DO NOT MERGE] Update pydantic to v2

#737 tcompa closed 7 months ago
2
Add breaking test for HCS plate metadata

#736 jluethi closed 7 months ago
2
Issue after MIP: Images shown empty in napari

#735 jluethi closed 7 months ago
2
Update poetry and GitHub action versions

#734 tcompa closed 7 months ago
1
[auto] Update dependencies in `poetry.lock`

#733 tcompa closed 7 months ago
1
Make NGFF validation more strict in tests

#732 tcompa closed 7 months ago
1
Update README

#730 jluethi closed 7 months ago
1
Update README

#729 jluethi closed 7 months ago
0
Update Changelog

#728 jluethi closed 7 months ago
1
701 import ome zarr fixes

#727 jluethi closed 7 months ago
1
Add test for 2D cellvoyager conversion & drop macos tests for Python 3.9 & Python 3.10

#726 jluethi closed 7 months ago
3
Centralize copying of tables functionality

#725 jluethi opened 7 months ago
0
723 Fix illumination correction task not copying tables

#724 jluethi closed 7 months ago
2
Illumination Correction task with `overwrite_input=False` is missing ROI tables

#723 jluethi closed 7 months ago
1
Drop overwrite from cellvoyager-to-ome-zarr-compute

#722 tcompa closed 7 months ago
4
Drop image list updates with only updated_images_urls

#721 jluethi opened 7 months ago
0
Role of `overwrite` in `cellvoyager_to_ome_zarr_compute.py`

#720 tcompa closed 7 months ago
2

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