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timbitz
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Whippet.jl
Lightweight and Fast; RNA-seq quantification at the event-level
MIT License
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LoadError: InexactError() with single end
#100
LucoLab
opened
4 years ago
0
Feature Request: Variable boundaries like SUPPA
#99
Alex-Nesta
opened
4 years ago
5
Quantification after creating an index supplemented with bam files produces NAs in evens of interest
#98
sopenaml
opened
4 years ago
3
MA-like plot
#97
JamalEH
opened
4 years ago
0
Question regarding relative proportion of TE events human transcriptome
#96
JamalEH
opened
4 years ago
11
update to julia >= 1.1
#95
gmassman
closed
3 years ago
1
Error quantifying psi with fq.gz
#94
jordi-vaquero
closed
4 years ago
3
update to julia >= 1.1
#93
gmassman
closed
4 years ago
1
How to compare .psi.gz files from two groups (or more than two samples) with different amount of samples in each condition.
#92
itszhengan
opened
4 years ago
0
can I use .tpm.gz files to perform gene/transcript differential expression analysis?
#91
JamalEH
closed
4 years ago
2
Indexing error
#90
ju-mu
opened
4 years ago
1
Info about upcoming removal of packages in the General registry
#89
KristofferC
closed
4 years ago
0
There's an additional column in the output files
#88
aleighbrown
closed
2 years ago
1
Merging bams for including novel splice sites makes a really big bam :(
#87
aleighbrown
opened
4 years ago
11
Creating annotation files
#86
Peter-J-Freeman
opened
5 years ago
1
Error on whippet-quant.jl
#85
jordi-vaquero
opened
5 years ago
1
working with fa files
#84
jordi-vaquero
closed
4 years ago
1
ArgumentError with whippet-delta.jl
#83
mmilevskiy
opened
5 years ago
2
Increase buffer sizes for input files
#82
timbitz
closed
5 years ago
1
How to interprete "NAs" in the psi.gz file?
#81
SiyiWanggou
opened
5 years ago
3
Error with whippet-delta.jl
#80
paulinefx
closed
5 years ago
2
bug with whippet-quant.jl
#79
limeng12
opened
5 years ago
4
Novel events
#78
KalynaLab
opened
5 years ago
2
Addition of Dockerfile for version 0.11
#77
fgypas
opened
5 years ago
1
Update PR for Julia v0.7
#76
timbitz
closed
5 years ago
1
Dockerfile for Whippet.jl
#75
fgypas
opened
5 years ago
2
Bug with whippet_quant and --stranded option?
#74
mblue9
opened
5 years ago
2
Julia 1.0 migration
#73
lachlansimpson
closed
3 years ago
2
Point estimate
#72
timbitz
opened
5 years ago
1
Fix deprecations
#71
femtocleaner[bot]
closed
5 years ago
1
Not showing concordance with other tools, can we manually normalize?
#70
seyfim
closed
6 years ago
2
De novo indexing using `--bam` capability
#69
timbitz
closed
6 years ago
2
Distributions.jl failing to precompile
#68
seyfim
closed
6 years ago
9
Added GTF file sanity checks, errors and warnings.
#67
timbitz
closed
6 years ago
1
Length term bugfix
#66
timbitz
closed
6 years ago
1
incorrect events matched
#65
AndrewLangvt
closed
6 years ago
2
Tandem UTR path length bugfix
#64
timbitz
closed
6 years ago
1
Some default value updates for v0.10.2
#63
timbitz
closed
6 years ago
1
Over-enumeration bugfix
#62
timbitz
closed
6 years ago
1
--circ Minor Bugfix
#61
timbitz
closed
6 years ago
1
Streaming on-the-fly re-analysis of RNA-seq data from ebi.ac.uk
#60
timbitz
closed
6 years ago
1
5' Sequence and fragment GC-content bias correction
#59
timbitz
closed
6 years ago
1
Whippet v0.10 isoform-level EM, Bias correction models
#58
timbitz
closed
6 years ago
1
Error tagging new release
#57
attobot
closed
6 years ago
0
Change Whippet installation/release to Pkg.clone()
#56
timbitz
closed
6 years ago
1
Julia v0.6 Compatibility
#55
timbitz
closed
6 years ago
1
Julia v0.6 Compatibility
#54
timbitz
closed
6 years ago
0
graph.jls
#53
AndrewLangvt
closed
6 years ago
3
GTF load error
#52
AndrewLangvt
closed
6 years ago
8
Whippet install issue with HttpParser
#51
AndrewLangvt
closed
6 years ago
4
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