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PistoiaHELM
/
HELMWebEditor
Web browser based editor for drawing HELM macromolecules.
MIT License
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10
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? should be used for unknown attachment points not *
#144
ClairePA
closed
6 years ago
2
Collapsing a group removes the annotation from the HELM string
#143
ClairePA
closed
6 years ago
2
No structure preview with inline SMILES
#142
MarkusWeisser
closed
6 years ago
18
Hydrogen pairing is recorded in section 3
#141
ClairePA
closed
6 years ago
2
I can't create a group containing peptide and oligo chains
#140
ClairePA
closed
6 years ago
4
Ratio information does not appear in the HELM string
#139
ClairePA
closed
6 years ago
11
It is possible to specify a bond position that does not exist
#138
ClairePA
closed
6 years ago
1
Ambiguous bond layout is confusing
#137
ClairePA
closed
6 years ago
2
You can't add an annotation to a simple polymer
#136
ClairePA
closed
6 years ago
2
Collapsing a group changes the simple polymer number
#135
ClairePA
closed
6 years ago
1
Being able to paste MolFile in JSDraw in monomer manager
#134
ypotier
closed
6 years ago
1
No validation on monomer position entries
#133
ClairePA
closed
6 years ago
8
Collapsing a group causes layout issues
#132
ClairePA
closed
6 years ago
2
Monomer numbering should reset when groups are created
#131
ClairePA
closed
6 years ago
5
The HELM for structures with groups is calculated differently if it is collapsed or expanded
#130
ClairePA
closed
6 years ago
6
Inconsistent nomenclature and use of the blob dialogue boxes
#129
ClairePA
closed
6 years ago
9
Brackets do not affect the molecule properties or structure view
#128
ClairePA
closed
6 years ago
8
Moving brackets does not change the HELM string
#127
ClairePA
closed
6 years ago
4
Can't change the number on brackets on the canvas
#126
ClairePA
closed
6 years ago
8
No structure preview on grouping elements R(A)P
#125
MarkusWeisser
closed
6 years ago
2
Search in monomers returns only monomer starting with search entry
#124
ypotier
closed
6 years ago
18
2 errors are thrown when entering wrong base
#123
ypotier
closed
6 years ago
4
Blob types need to be defined
#122
ClairePA
closed
6 years ago
3
You should not be able to enter a % in the ratio box
#121
ClairePA
closed
6 years ago
8
Null monomers appear in the monomer list
#120
ClairePA
closed
6 years ago
6
HELM string should not be spell-checked
#119
ClairePA
closed
6 years ago
2
Only one of the four ambiguous monomers is implemented.
#118
ClairePA
closed
6 years ago
12
Draw bond stop working after toolbar functionality is used
#117
ypotier
closed
6 years ago
2
Monomer positioning issue
#116
MarkusWeisser
closed
6 years ago
2
It is not clear what the "layout" button does
#115
ClairePA
closed
6 years ago
1
Definitions of R-groups for monomers
#114
MarkusWeisser
closed
6 years ago
6
Draw Bond tool/button
#113
milton900807
closed
6 years ago
2
zoom causes unintended centering of molecule
#112
milton900807
closed
6 years ago
5
Peptide layout is poor
#111
ClairePA
opened
7 years ago
0
Unknown monomers are stripped without warning
#110
ClairePA
closed
7 years ago
5
Load HELM sequence fails
#109
ypotier
closed
7 years ago
3
Monomers are not in alphabetical order
#108
ClairePA
closed
7 years ago
2
Find/replace does not work with position number
#107
ClairePA
closed
7 years ago
2
Monomer validation requires a natural analogue for a chem monomer
#106
ClairePA
closed
7 years ago
2
SMILES is not generated for new monomers
#105
ClairePA
closed
7 years ago
2
RNA base ID is wrong for complementary strand
#104
scilligence
closed
7 years ago
4
Structure monomers not connected
#103
ClairePA
closed
7 years ago
4
How to create ViewOnly HELM Viewer?
#102
scilligence
closed
7 years ago
0
Allow head-to-head and tail-to-tail connection
#101
scilligence
closed
7 years ago
2
Text in the HELM box is not wrapped
#100
ClairePA
closed
7 years ago
2
There is no validation on new monomers
#99
ClairePA
closed
7 years ago
8
Alphabetical ordering of monomers is not working
#98
ClairePA
closed
7 years ago
8
monomers are not scaled to the correct size if they are entered differently
#97
gwas
closed
7 years ago
3
Rules in the ruleset manager are not showing up in the canvas
#96
ClairePA
closed
7 years ago
2
Can't save a rule
#95
ClairePA
closed
7 years ago
2
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