yarden MISO issues - Githubissues

yarden / MISO

MISO: Mixture of Isoforms model for RNA-Seq isoform quantitation

http://genes.mit.edu/burgelab/miso/index.html

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issues

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RuntimeWarning: Long {deleted, inserted} alignment

#151 jma1991 opened 3 months ago
0
How to determine that a variable clipping event is a difference variable clipping event?

#150 happypiggyzjx opened 4 months ago
0
Error on Smart-seq paired-end data

#149 HZT55 opened 6 months ago
0
Misopy didn't work with pickle and gave an error on the file Gene.py

#148 mlcsmits opened 7 months ago
0
Installing and running miso

#147 Oliverfeudj opened 1 year ago
2
install error and plot error

#146 jingydz opened 1 year ago
0
Update all the dead genes.mit.edu links in the documentation page

#145 KidElectric opened 1 year ago
0
different maximum values of y-axis for different samples in one plot

#144 Seanduu closed 1 year ago
0
Alternative Splicing Events annotations download link is erro

#143 ChristopherLeeZG opened 3 years ago
2
ValueError: too many values to unpack

#142 husamia opened 3 years ago
0
which part should I modify?

#141 weifei888 opened 4 years ago
0
index_gff killed with no explanation

#140 husamia opened 4 years ago
0
annotation file links not working

#139 KunFang93 closed 4 years ago
1
Update sashimi.rst

#138 jrobinso opened 5 years ago
0
No events captured during compare differential isoforms

#137 Sealzad opened 5 years ago
0
import pysplicing

#136 MurliNair opened 5 years ago
5
Only works with samtools <= 1.2

#135 pcarbo opened 5 years ago
0
Unstable running results.

#134 tangxj98 opened 5 years ago
0
ValueError: numpy.dtype has the wrong size, try recompiling. Expected 88, got 96

#133 sneha100895 opened 5 years ago
1
RuntimeWarning: Long deleted alignment at pysplicing/src/solve.c:281

#132 zhengjiantao opened 5 years ago
1
RuntimeWarning

#131 zhengjiantao closed 5 years ago
0
About testing error

#130 zhengjiantao opened 5 years ago
1
sam_utils.py problem

#129 obenno opened 5 years ago
0
Installation error: setting file does not exist

#128 giuseppedelnapalle opened 6 years ago
0
The Python Apocalypse leads to Documentation Bug

#127 lachlansimpson opened 6 years ago
0
Queries related to Bayes factor, Exon Co-ordinates

#126 sarath-omics opened 6 years ago
0
How to get SAM file?

#125 werhoog opened 6 years ago
0
version 0.5.4 vs 0.5.2

#124 mcbenkface opened 6 years ago
1
Alternative Splicing Events annotations for GRCh38.

#123 edkonyakhina opened 6 years ago
3
MISO Output error

#122 ibmuller opened 6 years ago
1
Fix custom plot label option with filenames

#121 trevortknguyen opened 6 years ago
0
how to interpret the miso_posterior_mean

#120 yiyimanew opened 6 years ago
0
pip install issues

#119 fu opened 6 years ago
0
Problems with mpl_toolkits.axes_grid

#118 pedropenzuti opened 6 years ago
1
IndexError: too many indices for array

#117 limeng12 opened 6 years ago
4
Bug fix for sashimi_plot with --plot-label option

#116 tdanhorn opened 6 years ago
2
Error generating custom exon-centric annotations

#115 dejonggr closed 6 years ago
0
sashimi_plot with index_gff --compressed-id parameter

#114 genetalks-fred opened 7 years ago
0
Fixed crashing on alignment files without sequence data

#113 romansloutsky opened 7 years ago
1
check_gff_and_bam() fails when BAM file does not contain read sequences

#112 romansloutsky opened 7 years ago
0
fixing samtools sort output

#111 baileyglen opened 7 years ago
2
Download link does not work

#110 akthoma closed 7 years ago
1
summarize_miso error

#109 wxzheng001 closed 7 years ago
0
Python.h does not exist on pip install misopy

#108 AMChalkie opened 7 years ago
2
Can't use the most recent version of samtools

#107 MITiGEM2017 opened 7 years ago
2
Colons in job file name causing problems with SGE qsub

#106 sepidehparhami opened 7 years ago
1
Issue parsing queue job id

#105 sepidehparhami opened 7 years ago
1
settings.txt does not exist

#104 royfrancis opened 7 years ago
5
Bug in credible_intervals.py

#103 jano15 closed 7 years ago
5
index_gff take very long time

#102 jano15 closed 7 years ago
0