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PecanProject
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pecan
The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.
www.pecanproject.org
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Replacing 'testthat' functions #2987
#3067
Its-Maniaco
closed
3 months ago
15
Use DB mocking for tests that require BETY?
#3066
Aariq
opened
1 year ago
3
Fix for #2968 to add `write` argument to `get.trait.data()` and friends
#3065
Aariq
closed
1 year ago
2
Use `options()` for project-level settings like `write`
#3064
Aariq
opened
1 year ago
1
Uninformative error when machine id isn't registered in BETY
#3063
Aariq
opened
1 year ago
1
After updating to new docker-compose.yml (develop) and docker images, Pecan/BETYdb web interface is no longer available
#3062
Chris-Schnaufer
closed
1 year ago
5
Calculation of NEON soil carbon initial condition for whole soil profile
#3061
Qianyuxuan
closed
1 year ago
0
Add keywords to DESCRIPTION files
#3060
Aariq
opened
1 year ago
2
Neon initial soil carbon fraction calculation
#3059
Qianyuxuan
closed
1 year ago
7
find fqdn across platforms
#3058
dlebauer
closed
1 year ago
0
`get.trait.data.pft()` doesn't use <bety><write> tag
#3057
Aariq
closed
1 year ago
1
Add total soil carbon and standard deviation for 0-30cm
#3056
Qianyuxuan
closed
1 year ago
0
fix for tidyselect 1.2.0
#3055
Aariq
closed
1 year ago
3
pecan_version: Report installation source for each package
#3054
infotroph
closed
6 months ago
1
[WIP] Run meta analysis for a settings file API
#3053
koolgax99
opened
1 year ago
2
Sda dongchen
#3052
DongchenZ
closed
1 year ago
0
Allow HTML comments in pecan.xml and warn when named .xml doesn't exist
#3051
Aariq
closed
1 year ago
0
Allow specifying soil variables from PEcAn.ED2
#3050
Aariq
opened
1 year ago
1
Update of Soilgrids extraction codes with new documents and return format
#3049
Qianyuxuan
closed
1 year ago
0
Remove unused functions from data.land
#3048
infotroph
closed
1 year ago
0
change job.sh tag to prerun
#3047
Aariq
closed
1 year ago
0
Fixes a typo: "specie" isn't a word
#3046
Aariq
closed
1 year ago
1
add a test for fqdn()
#3045
Aariq
closed
1 year ago
0
Failing windows build of `PEcAn.ED2`: bug in `fqdn()`?
#3044
Aariq
closed
1 year ago
5
Give packages their own READMEs
#3043
Aariq
closed
1 year ago
1
Docker tweaks
#3042
infotroph
closed
1 year ago
0
Qli soc
#3041
serbinsh
closed
1 year ago
0
Add script that extracts Soilgrids SOC based on location of sites
#3040
Qianyuxuan
closed
1 year ago
6
Script that extracts Soilgrids SOC based on location of sites
#3039
Qianyuxuan
closed
1 year ago
1
Sda dongchen
#3038
DongchenZ
closed
1 year ago
0
Sda dongchen
#3037
DongchenZ
closed
1 year ago
0
Adding SDA restart capability
#3036
helge22a
closed
1 year ago
1
Fix bug in writing new tags to ED2IN
#3035
Aariq
closed
1 year ago
1
ED2IN tags not in template aren't added from pecan.xml
#3034
Aariq
closed
1 year ago
0
set defaults for new ED2IN vars
#3033
Aariq
closed
1 year ago
1
New ED2IN for latest on GitHub
#3032
Aariq
closed
1 year ago
9
build docker image with git version of ED2 also
#3031
Aariq
closed
1 year ago
0
Build docker container with git version of ED2
#3030
Aariq
closed
1 year ago
0
Minor change to generate deps script
#3029
Aariq
closed
1 year ago
2
assume nothing about characters after "PEcAn" in package name
#3028
infotroph
closed
1 year ago
0
Shifting minimize.GP.R from emulator to assim.batch
#3027
nanu1605
closed
1 year ago
4
Shifted convert.input.R from utils to DB
#3026
nanu1605
closed
1 year ago
1
Copy all run and out dirs at once, not in for-loop
#3025
Aariq
closed
1 year ago
5
Default when `<ensembles>` is missing is not functional
#3024
Aariq
opened
2 years ago
2
Better test data for ED2
#3023
Aariq
opened
2 years ago
0
SDA name change
#3022
helge22a
closed
1 year ago
2
Change `model2netcdf.ED2()` to include more variables from monthly -E- files and group by PFT
#3021
Aariq
closed
1 year ago
2
Suppress warnings in `modify_ed2in()` about directories on remote server
#3020
Aariq
closed
1 year ago
0
Some ensemble `run` directories don't get copied over to HPC
#3019
Aariq
closed
1 year ago
0
only open one connection to BETY instead of one per PFT (#2967)
#3018
Aariq
closed
2 years ago
1
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